NNTTTTATTGGGCCTATAGACTCCTATAGGGAGAGGATCCGCGGAATTCA
TTTGCATGAGTGTTCATTTGAGTCTCCTTGGAATGAAAAAGAAGAGGCTC
TGGGTACTTACATGATGGGGAGTGGGAAGACTCTGGGTACTGTGTGAACT
ATATGTAGTCATGTTCAGAACATGATCAAGGTTGTTTCACTGGACTCTGT
TTCAAGGTTATGTCAGTGTATGGTCACTTGTCTACTAATATTGTTATTCA
GGAGAATGGGGTTTTGATTGAAATAGAGATGTCTTGGAAGATATATCTGC
AGGGTTCAGATGAGGACAGGTGTCCCTTGTTTTGCTTTTCAAGCCCCGAA
AGCTAATTAATCCTTAAAGGACATGATATTGAACTTGTTTCAAATTCACT
GGCATTGATTCAACAAGACACAGCAGCTCAAAACACGGATATCAGAAAAG
TTTTGGATGGCATCTATTAGCCGGAAAAAGGAGCAATTCAGCATTCTGCT
GAGTAAGACCTAAGTCACTCAGCTCCAGAAATAAGATACTGAATTGTAAG
CCTGATTTGCGATGTCTCCGGGGATAATAAAAGACTTCTATTAAAATTAT
TAACTTTTCATAAATGTTTTTAAATTGGCTCAAACTCAAAGAAAATATAA
TCAGAGGAAGGGTGTGCCTAATTTCCCAGACTTCACTAATTTTGAAGGTC
AAAACAAAAGGGCCCTGTTTCTATTGCCAAAGAAAGATTTTTGCAAATAT
CAACACGTTTTAAGAAGGAGTATCTATATGAATAACTTTTTCTGGAACCA
TCCTTGAAAAACTATTTTAGTTGATACAGAAACTGCCATTGGTGATTTAT
GTCAATAAATCACTACTTATTGCTGTTCTTGTGAAGACATGTCATGAAAA
GTCCAGCTGTTGTTATCAGGAACTCCTTCAAAGTTGTGAAGTGCTTTACC
TTACAATGGAGTTGTGTTTACCGCTATTTACCTTATGAACCTATTTAGAA
TTTGCACGGTTTAAAATATTTTGCCCCTTTAATTTATATTTTCCTTAAAG
CTTTGAAAAATTTTACCTACCCATTTCTTCAAAACCTTCTTATTAAACCT
TCCCCTATTTTGAACCCTTTTTAAAGGGCTCAAATTATATAATTTCTTTC
CACCCCGCGAAAGTANAACTGTGAAAACCCCCTTTTCCTCTTCTTGGCCT
TACAA

NTAGCAAGGAGGCTGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXCCTTTAAAAGTCTAAAGAGGAACCATTGCTTGGGTGC
AGGACCTTTTAAAGAAATGCAGAGAGGAGTTGTACATCACAAGGGATCTG
ATCTAGGATACGGGACAGAAAAGGGACCTCTAATTAGTGAGGTGACATGA
AAATCATAAGGAATTACACTAATTCCTACTTAATAACTGCCTGAAAAACA
AAACTATGAACAATGACTTTTAAAGAAACATTTATGAATTTTATTTAGAA
ACAGCTCATATAGAGTTTTGATGATTTTTAAATGCATATATTAATTTGGT
AAGTTTTATTGTTTCTCCGTGTGAGTTTCTATGTGGTATTTACTTATTGA
AAACATAACAGTGTGGTTTCTTATCTTTGAGCTCTTTCACATGTTCTTTT
CACATGCGTTACAGAGTTTATAATGACACACCATTAAATCATCTTGATGA
TACCGAACATCCATATCCTAATACTATTGCATTTCATTCCTTTTATTCAT
GATGAAGGATGTTTGTAGAGGTTTCTGTGTCCAGTTATATTGATCATGAG
GGGCGATTGCTGATGTTTATAACTAAGTTTTATTCCAGCTGATAAAGTCT
TCCACTTTTAGTTTTGTGACGCCTTTAAAACATATATGGATAGTGAAATA
TTTTACTTGATTTCTCTTACATATCATTATTTTATACTCAATCTACCACA
ATAATAAACAATGTTTAATACATTTCTGTGACCCTGATCATTCCTTGATT
TTTCCCGACTTTGTAATTATTTTATGATTTTTAAGGTAACCAATTTTCTT
CCATTTATATTCAATTCTTAAAAACTCTACTGTAAGTGCTTAACTCTCTT
GGTTTGCAGGCCCTGTTAAGTACTTTTATTTTCAAAAGCTCCCTAATTGA
AACTTCCTTTCCCTTTTTTTTGTGAACCCATACTATAATTTTTAAGGCCC
CCGGCTTTAAACTTTTTTTCTGGATTTACTAAACCCCCCAGTCATCCTAT
TTTTGGAAATATAGCAAAATATCCCCTTAATTTTAAATCTTTTTTTAAAT
GGCCTCCTTTATTTTATTGGAATATTTTTATTTTTCCATTCCCGCGTTAA
NAATTCCTTATTTATTTCCTCTCCTCTGTGGTTGCGCTTATATATCNTGT
ACTTATACTTCT

Query= MSMg01no111_f11.b1 MSMg01no111_f11.b1 CHROMAT_FILE:
MSMg01no111_f11.b1 PHD_FILE: MSMg01no111_f11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:15:32 2005
         (696 letters)



>mm_chr13_119298702_119299797
          Length = 1096

 Score = 1330 bits (688), Expect = 0.0
 Identities = 694/696 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctccttggaatgaaaaagaagaggctctgggtacttacatgatggggagtgggaagact 60
           ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 896 tctccttggaatgaaaaagaagaggctctgggtaggtacatgatggggagtgggaagact 837

                                                                       
Query: 61  ctgggtactgtgtgaactatatgtagtcatgttcagaacatgatcaaggttgtttcactg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 ctgggtactgtgtgaactatatgtagtcatgttcagaacatgatcaaggttgtttcactg 777

                                                                       
Query: 121 gactctgtttcaaggttatgtcagtgtatggtcacttgtctactaatattgttattcagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 gactctgtttcaaggttatgtcagtgtatggtcacttgtctactaatattgttattcagg 717

                                                                       
Query: 181 agaatggggttttgattgaaatagagatgtcttggaagatatatctgcagggttcagatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 agaatggggttttgattgaaatagagatgtcttggaagatatatctgcagggttcagatg 657

                                                                       
Query: 241 aggacaggtgtcccttgttttgcttttcaagccccgaaagctaattaatccttaaaggac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 aggacaggtgtcccttgttttgcttttcaagccccgaaagctaattaatccttaaaggac 597

                                                                       
Query: 301 atgatattgaacttgtttcaaattcactggcattgattcaacaagacacagcagctcaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 atgatattgaacttgtttcaaattcactggcattgattcaacaagacacagcagctcaaa 537

                                                                       
Query: 361 acacggatatcagaaaagttttggatggcatctattagccggaaaaaggagcaattcagc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 acacggatatcagaaaagttttggatggcatctattagccggaaaaaggagcaattcagc 477

                                                                       
Query: 421 attctgctgagtaagacctaagtcactcagctccagaaataagatactgaattgtaagcc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 attctgctgagtaagacctaagtcactcagctccagaaataagatactgaattgtaagcc 417

                                                                       
Query: 481 tgatttgcgatgtctccggggataataaaagacttctattaaaattattaacttttcata 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 tgatttgcgatgtctccggggataataaaagacttctattaaaattattaacttttcata 357

                                                                       
Query: 541 aatgtttttaaattggctcaaactcaaagaaaatataatcagaggaagggtgtgcctaat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 aatgtttttaaattggctcaaactcaaagaaaatataatcagaggaagggtgtgcctaat 297

                                                                       
Query: 601 ttcccagacttcactaattttgaaggtcaaaacaaaagggccctgtttctattgccaaag 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 ttcccagacttcactaattttgaaggtcaaaacaaaagggccctgtttctattgccaaag 237

                                               
Query: 661 aaagatttttgcaaatatcaacacgttttaagaagg 696
           ||||||||||||||||||||||||||||||||||||
Sbjct: 236 aaagatttttgcaaatatcaacacgttttaagaagg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 696
Length of database: 1096
Length adjustment: 10
Effective length of query: 686
Effective length of database: 1086
Effective search space:   744996
Effective search space used:   744996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no111_f11.g1 MSMg01no111_f11.g1 CHROMAT_FILE:
MSMg01no111_f11.g1 PHD_FILE: MSMg01no111_f11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:15:32 2005
         (481 letters)



>mm_chr13_119210258_119211138
          Length = 881

 Score =  907 bits (469), Expect = 0.0
 Identities = 478/481 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   gagaggagttgtacatcacaagggatctgatctaggatacgggacagaaaagggacctct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagaggagttgtacatcacaagggatctgatctaggatacgggacagaaaagggacctct 260

                                                                       
Query: 61  aattagtgaggtgacatgaaaatcataaggaattacactaattcctacttaataactgcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattagtgaggtgacatgaaaatcataaggaattacactaattcctacttaataactgcc 320

                                                                       
Query: 121 tgaaaaacaaaactatgaacaatgacttttaaagaaacatttatgaattttatttagaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaaaaacaaaactatgaacaatgacttttaaagaaacatttatgaattttatttagaaa 380

                                                                       
Query: 181 cagctcatatagagttttgatgatttttaaatgcatatattaatttggtaagttttattg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagctcatatagagttttgatgatttttaaatgcatatattaatttggtaagttttattg 440

                                                                       
Query: 241 tttctccgtgtgagtttctatgtggtatttacttattgaaaacataacagtgtggtttct 300
           ||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||
Sbjct: 441 tttctccgtgtgagtttctatgtggtatttacagaatgaaaacataacagtgtggtttct 500

                                                                       
Query: 301 tatctttgagctctttcacatgttcttttcacatgcgttacagagtttataatgacacac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatctttgagctctttcacatgttcttttcacatgcgttacagagtttataatgacacac 560

                                                                       
Query: 361 cattaaatcatcttgatgataccgaacatccatatcctaatactattgcatttcattcct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cattaaatcatcttgatgataccgaacatccatatcctaatactattgcatttcattcct 620

                                                                       
Query: 421 tttattcatgatgaaggatgtttgtagaggtttctgtgtccagttatattgatcatgagg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttattcatgatgaaggatgtttgtagaggtttctgtgtccagttatattgatcatgagg 680

            
Query: 481 g 481
           |
Sbjct: 681 g 681


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space:   410241
Effective search space used:   410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)