Query= MSMg01no113_c09.b1 MSMg01no113_c09.b1 CHROMAT_FILE:
MSMg01no113_c09.b1 PHD_FILE: MSMg01no113_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:18:30 2005
(342 letters)
>mm_chr13_44948180_44948921
Length = 742
Score = 632 bits (327), Expect = 0.0
Identities = 327/327 (100%)
Strand = Plus / Minus
Query: 14 aaaatactgtgaagtgagaagatgattctattttaccacatatgtacaacccttcacaga 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aaaatactgtgaagtgagaagatgattctattttaccacatatgtacaacccttcacaga 373
Query: 74 ataaaatacatgaggctaaaacaaagaacagaacctgccactggcagcaaattataaata 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ataaaatacatgaggctaaaacaaagaacagaacctgccactggcagcaaattataaata 313
Query: 134 ttaaactctttccagttttttgttttttttttaaatgccagggcattagatctaaagcaa 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ttaaactctttccagttttttgttttttttttaaatgccagggcattagatctaaagcaa 253
Query: 194 agaaagtaaccagtgctaaatacacagggcagggtgaaccctttaatctcagcactggag 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 agaaagtaaccagtgctaaatacacagggcagggtgaaccctttaatctcagcactggag 193
Query: 254 aaacacaggcaggtggattccaaatcagtacagagcaagttccaggagatacataagaga 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 aaacacaggcaggtggattccaaatcagtacagagcaagttccaggagatacataagaga 133
Query: 314 cggggtgtgtgtgtgtgtgtgtgtgtg 340
|||||||||||||||||||||||||||
Sbjct: 132 cggggtgtgtgtgtgtgtgtgtgtgtg 106
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no113_c09.g1 MSMg01no113_c09.g1 CHROMAT_FILE:
MSMg01no113_c09.g1 PHD_FILE: MSMg01no113_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:18:30 2005
(338 letters)
>mm_chr13_44783433_44784170
Length = 738
Score = 634 bits (328), Expect = 0.0
Identities = 337/340 (99%), Gaps = 2/340 (0%)
Strand = Plus / Plus
Query: 1 ctatggagaccaggctgaccttgaactc-cagaggtcagcctgtctctgggactgggact 59
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 199 ctatggagaccaggctgaccttgaactcacagaggtcagcctgtctctgggactgggact 258
Query: 60 aaaggtgtgtatacatacc-accacgtgcagcttgggaacctccctgcccggcttagcac 118
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aaaggtgtgtatacatacccaccacgtgcagcttgggaacctccctgcccggcttagcac 318
Query: 119 tcacagtgtaggttagtgcatactgcattaagtcagcactttattgtcatttaaaacaat 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tcacagtgtaggttagtgcatactgcattaagtcagcactttattgtcatttaaaacaat 378
Query: 179 gattcaaaacttgtttcaggaaacagcttactttcagtactggcgactggacctagggat 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gattcaaaacttgtttcaggaaacagcttactttcagtactggcgactggacctagggat 438
Query: 239 taataaatgctagcaagcactgtatcaatgagtttatatacccagccccctaaaaatgtt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 taataaatgctagcaagcactgtatcaatgagtttatatacccagccccctaaaaatgtt 498
Query: 299 ttaaggccagccctggaccctaacggaaatgaccatggaa 338
|||||||||| |||||||||||||||||||||||||||||
Sbjct: 499 ttaaggccaggcctggaccctaacggaaatgaccatggaa 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
