Query= MSMg01no114_h04.b1 MSMg01no114_h04.b1 CHROMAT_FILE:
MSMg01no114_h04.b1 PHD_FILE: MSMg01no114_h04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:08 2005
(544 letters)
>mm_chr13_65055143_65056086
Length = 944
Score = 1036 bits (536), Expect = 0.0
Identities = 539/540 (99%)
Strand = Plus / Plus
Query: 5 gaattctctggtgtgcactaaggtataatttcaggaatgttttcccacatttattacatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctggtgtgcactaaggtataatttcaggaatgttttcccacatttattacatt 264
Query: 65 cataggattttacctctatgtgaattctctgacatactgagggtcaaagtttaggcaagt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cataggattttacctctatgtgaattctctgacatactgagggtcaaagtttaggcaagt 324
Query: 125 gattttccacacatcttacattcataggttttctccaccatcttaactctttgatataaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gattttccacacatcttacattcataggttttctccaccatcttaactctttgatataaa 384
Query: 185 cttacatataaattctcagagaaagtcttcccacgttcattacatttgtagtgtttctcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cttacatataaattctcagagaaagtcttcccacgttcattacatttgtagtgtttctcc 444
Query: 245 catatataaattctgtggtgtgctctgagattatatatcttggagaacattttttcacat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 catatataaattctgtggtgtgctctgagattatatatcttggagaacattttttcacat 504
Query: 305 acatcttagtcacagtttctctcctatgtgaactctcattttcttttcaattgtccatca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acatcttagtcacagtttctctcctatgtgaactctcattttcttttcaattgtccatca 564
Query: 365 cagagagtgtgtccttatattcactactttatcatgatagggttttatgtctggatatat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cagagagtgtgtccttatattcactactttatcatgatagggttttatgtctggatatat 624
Query: 425 ttttttttatgtccttaacatgtgacatgaaagatttctcacagctatgactaccatgag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttttttttatgtccttaacatgtgacatgaaagatttctcacagctatgactaccatgag 684
Query: 485 gtttttccttggctaagattcaaatattcattgagatttgacttttgacagaaaaatttc 544
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gtttttccttggttaagattcaaatattcattgagatttgacttttgacagaaaaatttc 744
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space: 498756
Effective search space used: 498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no114_h04.g1 MSMg01no114_h04.g1 CHROMAT_FILE:
MSMg01no114_h04.g1 PHD_FILE: MSMg01no114_h04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:08 2005
(508 letters)
>mm_chr13_65200101_65201008
Length = 908
Score = 977 bits (505), Expect = 0.0
Identities = 508/509 (99%), Gaps = 1/509 (0%)
Strand = Plus / Minus
Query: 1 caggacagccagggctacacagagaaaccctgtcttgaaaaaaaaaaaccaaaaaaccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 caggacagccagggctacacagagaaaccctgtcttgaaaaaaaaaaaccaaaaaaccca 723
Query: 61 aaaaaacaaaaagaaaaagaaaacaaaacaacaaaaaaagaaatagcatggtggtctaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 aaaaaacaaaaagaaaaagaaaacaaaacaacaaaaaaagaaatagcatggtggtctaag 663
Query: 121 ctggcctcagacttacaattctactgtctcagcttcccaagtgctaggatttcaggtatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ctggcctcagacttacaattctactgtctcagcttcccaagtgctaggatttcaggtatg 603
Query: 181 aaccactacagtgtgtctgtttttatattcaatcagcattgcagccacatgtctgcattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aaccactacagtgtgtctgtttttatattcaatcagcattgcagccacatgtctgcattt 543
Query: 241 taatgaacttcataaagcagaatctcaggttgagagaaaaaacaaaacacttgaagatgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 taatgaacttcataaagcagaatctcaggttgagagaaaaaacaaaacacttgaagatgc 483
Query: 301 atgtgatagctggataagacagtgtagtttcctgtcccccttaatcccccctcctccccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 atgtgatagctggataagacagtgtagtttcctgtcccccttaatcccccctcctccccc 423
Query: 361 aagcttcttgcagagggccctttgaaggaacactttttttttttaaattgtttttcttat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aagcttcttgcagagggccctttgaaggaacactttttttttttaaattgtttttcttat 363
Query: 421 ttacatttcaaatgttatcccctttcccagtttcccctccgaaaatcccctattcca-cc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 362 ttacatttcaaatgttatcccctttcccagtttcccctccgaaaatcccctattccaccc 303
Query: 480 ccccccccccaactcacccactcccattc 508
|||||||||||||||||||||||||||||
Sbjct: 302 ccccccccccaactcacccactcccattc 274
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space: 447204
Effective search space used: 447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
