Query= MSMg01no115_b05.b1 MSMg01no115_b05.b1 CHROMAT_FILE:
MSMg01no115_b05.b1 PHD_FILE: MSMg01no115_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:55 2005
(299 letters)
>mm_chr13_31717990_31718688
Length = 699
Score = 578 bits (299), Expect = e-169
Identities = 299/299 (100%)
Strand = Plus / Minus
Query: 1 gctggccgggtcgatggtccagtagtggcccttaccaggtctcccgaggcccttgggcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gctggccgggtcgatggtccagtagtggcccttaccaggtctcccgaggcccttgggcag 440
Query: 61 cttgatgaagcactcgttgagcgagaggttgtggcgcacggagttcttccagccctggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cttgatgaagcactcgttgagcgagaggttgtggcgcacggagttcttccagccctggta 380
Query: 121 ggcgccacggaaaaaggggaagcgcgcctgtaggaactggtagatctcactgagcgtcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ggcgccacggaaaaaggggaagcgcgcctgtaggaactggtagatctcactgagcgtcag 320
Query: 181 gcgcttgctgggcgagctctggatggccatgacgatgagcgcgatgtacgagtaaggagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gcgcttgctgggcgagctctggatggccatgacgatgagcgcgatgtacgagtaaggagg 260
Query: 241 cttctccggccgccgcagccccgaggttgccttcttggtgcctccactcccggcgcccg 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 cttctccggccgccgcagccccgaggttgccttcttggtgcctccactcccggcgcccg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 699
Length adjustment: 9
Effective length of query: 290
Effective length of database: 690
Effective search space: 200100
Effective search space used: 200100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no115_b05.g1 MSMg01no115_b05.g1 CHROMAT_FILE:
MSMg01no115_b05.g1 PHD_FILE: MSMg01no115_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:56 2005
(587 letters)
>mm_chr13_31595048_31596034
Length = 987
Score = 1077 bits (557), Expect = 0.0
Identities = 581/591 (98%), Gaps = 4/591 (0%)
Strand = Plus / Plus
Query: 1 tcacaaagacagatcaaatgcacgcttgctcaaaggccgagtcttcaaaacatctgaact 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 197 tcacaaagacagatcaaatgcacgcttgctcaaaagccgagtcttcaaaacatctgaact 256
Query: 61 caccacatcctgaaaggaaaacatagacaaacacaccacacgggactttctgaatttgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 caccacatcctgaaaggaaaacatagacaaacacaccacacgggactttctgaatttgaa 316
Query: 121 ttggttctgcataatttttaaatacgccaattttcgttaagataaaaattgtaacaatta 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ttggctctgcataatttttaaatacgccaattttcgttaagataaaaattgtaacaatta 376
Query: 181 aaacaaccttcaaactttaagtctttataaatataaactgatgaaaatgtaaacagtgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aaacaaccttcaaactttaagtctttataaatataaactgatgaaaatgtaaacagtgat 436
Query: 241 ttaagaacttttcagtgagctagcccaacaaatgaaacaggcagaaaagcaatgggactt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ttaagaacttttcagtgagctagcccaacaaatgaaacaggcagaaaagcaatgggactt 496
Query: 301 tttttttttttttttttttttt----gcaaagtatatgtgatgagggaagagaagtgaga 356
|||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 497 ttttttttttttttttttttttttttgcaaagtatatatgatgagggaagagaagtgaga 556
Query: 357 tgagcccagacaaagctatgaaaagcctgagatgccactgaaaagctgaatacctaccta 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tgagcccagacaaagctatgaaaagcctgagatgccactgaaaagctgaatacctaccta 616
Query: 417 gcacttaggaagccttccactccatctctagtactttaaaaataaattttaattgtttaa 476
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gcacttaggacgccttccactccatctctagtactttaaaaataaattttaattgtttaa 676
Query: 477 ttatattaagagcctggggaacctgatgcgctaccctgtgagcaacagctgttgcatgtt 536
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 677 ttatattaagagcctggggaacctgatgcgctaccctgtgagcaacagctgttgcacgtt 736
Query: 537 cttcaggagagcaaacatcagccaaggttggagtggatttaggtgcagcga 587
|||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 737 cttcaggagagcaaacatcagccatggttggagtggatttaggtgcagcga 787
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space: 563729
Effective search space used: 563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
