Query= MSMg01no117_j19.b1 MSMg01no117_j19.b1 CHROMAT_FILE:
MSMg01no117_j19.b1 PHD_FILE: MSMg01no117_j19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:13 2005
(294 letters)
>mm_chr13_37121237_37121929
Length = 693
Score = 526 bits (272), Expect = e-154
Identities = 287/292 (98%), Gaps = 1/292 (0%)
Strand = Plus / Minus
Query: 1 ggagctacaaaaaagaaaaagcagttgcataagtaaatatagccaagtaactacataggt 60
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 491 ggagctacaaagaagaaaaagcagttacataagtaaatatagccaagtaactacataggt 432
Query: 61 gagagatctgtgggcgtctgtgtgaaattgcaatcccctattgatagaaatgacatcaga 120
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 431 gagagatctgtgggtgtctgtgtgaaattg-aatcccctattgatagaaatgacatcaga 373
Query: 121 gtgtgttttaagggttttgtttcagcagatgcttaatgtaaatctatagtaagctaccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gtgtgttttaagggttttgtttcagcagatgcttaatgtaaatctatagtaagctaccag 313
Query: 181 tgcccaatgatgccttacctgaagaaaccaaaatatgcttttttatttttataagatgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tgcccaatgatgccttacctgaagaaaccaaaatatgcttttttatttttataagatgta 253
Query: 241 gtggactcattagtattttattggaaaactgcagtcagaataatgtatataa 292
||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 252 gtggactcattagtagtttattggaaaactgcagtcagaataatgtatataa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 693
Length adjustment: 9
Effective length of query: 285
Effective length of database: 684
Effective search space: 194940
Effective search space used: 194940
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no117_j19.g1 MSMg01no117_j19.g1 CHROMAT_FILE:
MSMg01no117_j19.g1 PHD_FILE: MSMg01no117_j19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:13 2005
(298 letters)
>mm_chr13_36962073_36962772
Length = 700
Score = 530 bits (274), Expect = e-155
Identities = 293/300 (97%), Gaps = 2/300 (0%)
Strand = Plus / Plus
Query: 1 tttctagagccttgcttgcaggttaggttgaatttcacagaatcctaaacatctggaagc 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttctagagtcttgcttgcaggttaggttgaatttcacagaatcctaaacatctggaagc 260
Query: 61 aagacggggagctttcaacacactggagcagaagagctgactgcttccacctggaggtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagacggggagctttcaacacactggagcagaagagctgactgcttccacctggaggtgg 320
Query: 121 cttgatacaggctgctcagggcagacttgctccaaatggctcactgtcatgctagcattg 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 cttgatacaggctgctcagggcagacttgctccaaatggctcactggcatgctagcattg 380
Query: 181 ctccggtgggcttggagccccaaaggtgctataaatacttagtaattatggatttttaga 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctccggtgggcttagagccccaaaggtgctataaatacttagtaattatggatttttaga 440
Query: 241 tgttatgaaaatgtacattttgattatataataataccaaa--aaaataattttggtcat 298
||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 tgttatggaaatggacattttgattatataataataccaaagaaaaataattttggtcat 500
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 700
Length adjustment: 9
Effective length of query: 289
Effective length of database: 691
Effective search space: 199699
Effective search space used: 199699
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
