Query= MSMg01no117_o15.b1 MSMg01no117_o15.b1 CHROMAT_FILE:
MSMg01no117_o15.b1 PHD_FILE: MSMg01no117_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:36 2005
(243 letters)
>mm_chr13_101554176_101554818
Length = 643
Score = 447 bits (231), Expect = e-130
Identities = 240/243 (98%)
Strand = Plus / Plus
Query: 1 ggtggctcacaaatgcctgcaactccggctccagctccaaagaactctgtctcttcaggc 60
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggtggctcacaaacgcctgcaacgccggctccagctccaaagaactctgtctcttcaggc 260
Query: 61 ctaacatacacacaattgggcacagacacacaaaaaagtactctcaatactagtaggtaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaacatacacacaattgggcacagacacacaaaaaagtactctcaatactagtaggtaa 320
Query: 121 agcaagtcaaaggaacagataataaagtcatttatccatcagctcagccccacgtgaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcaagtcaaaggaacagataataaagtcatttatccatcagctcagccccacgtgaact 380
Query: 181 tgattcaaaagaatgctaagccagcaatcttttttcaggtgtatccaagcccctgattac 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 tgattcaaaagaatgctaagccagcaatctttattcaggtgtatccaagcccctgattac 440
Query: 241 aga 243
|||
Sbjct: 441 aga 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no117_o15.g1 MSMg01no117_o15.g1 CHROMAT_FILE:
MSMg01no117_o15.g1 PHD_FILE: MSMg01no117_o15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:36 2005
(242 letters)
>mm_chr13_101660241_101660882
Length = 642
Score = 447 bits (231), Expect = e-130
Identities = 240/243 (98%), Gaps = 2/243 (0%)
Strand = Plus / Minus
Query: 1 taaagcagcttttcatcacagggaagttattcatgcacacagtacataagtcattccaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 taaagcagcttttcatcacagggaagttattcatgcacacagtacataagtcattccaca 383
Query: 61 atcctgttcccacacacacagccctggcgatcccatctcctccttacccttgcaattcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 atcctgttcccacacacacagccctggcgatcccatctcctccttacccttgcaattcta 323
Query: 121 aaatgtttatgtcactactcctggagtt-tgccggttcagcattacgtattctgcaccat 179
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 322 aaatgtttatgtcactactcctggagttct-ccggttcagcattacgtattctgcaccat 264
Query: 180 ggaagatgacttcatgcgtgcacagccacctgcatacacacaaccccgccacatacagtc 239
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 263 ggaagatgacttcatgcgtgcacagccacctgcacacacacaaccccgccacatacagtc 204
Query: 240 ttc 242
|||
Sbjct: 203 ttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
