Query= MSMg01no124_a22.b1 MSMg01no124_a22.b1 CHROMAT_FILE:
MSMg01no124_a22.b1 PHD_FILE: MSMg01no124_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:34:38 2005
(375 letters)
>mm_chr13_26481483_26482257
Length = 775
Score = 679 bits (351), Expect = 0.0
Identities = 372/383 (97%), Gaps = 8/383 (2%)
Strand = Plus / Plus
Query: 1 tgaatgtgtccagtcagaggcaactgacagttgcataaattacagctgatttcatcttgt 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 tgaatgtgtccagtcagaggcaactgacagttgaataaattacagctgatttcatcttgt 260
Query: 61 taatgaaaaataactttcaaataggtgaagagaaaagttaattttctctactctaactta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taatgaaaaataactttcaaataggtgaagagaaaagttaattttctctactctaactta 320
Query: 121 ttatc--acacacacacacacacacacacacacacacacacacacacacacacacac--- 175
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttatctcacacacacacacacacacacacacacacacacacacacacacacacacacaca 380
Query: 176 ---gtatacacagtagcattttggaatgtaaactttaaatagagacaacttatatttatt 232
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catgtatacacagtagcattttggaatgtaaactttaaatagagacaacttatatttatt 440
Query: 233 caactttttaagaaggaactagccttatccatttatggtgactcatgcctgtactcatgg 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caactttttaagaaggaactagccttatccatttatggtgactcatgcctgtactcatgg 500
Query: 293 catttgaaaacataaggcagaaatattgccgtgaatttgaggctagcctggattatatag 352
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 501 catttgaaaacataaggcagaaatattgctgtgaatttgaggctagcctggattatatag 560
Query: 353 taaaagaaaaacctggacttgga 375
|||||| ||||||||||||||||
Sbjct: 561 taaaaggaaaacctggacttgga 583
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 58
Number of extensions: 26
Number of successful extensions: 26
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no124_a22.g1 MSMg01no124_a22.g1 CHROMAT_FILE:
MSMg01no124_a22.g1 PHD_FILE: MSMg01no124_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:34:38 2005
(787 letters)
>mm_chr13_26605013_26606199
Length = 1187
Score = 1483 bits (767), Expect = 0.0
Identities = 782/787 (99%)
Strand = Plus / Minus
Query: 1 ggtttcctgagcaatgagttcatgtaaaacccttcagcttccatcttaataatgacaaga 60
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 912 ggtttcctgagcaatgagttcatgtaaaaccccacagcttccatcttaataatgacaaga 853
Query: 61 caaccatattagcactcaagggatgattatttttttaaagtggcaataggcgagcatatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 caaccatattagcactcaagggatgattatttttttaaagtggcaataggcgagcatatt 793
Query: 121 gatgtgattataatatgagcctgtgcgtgttctttcctctctgaagatagactcattatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 gatgtgattataatatgagcctgtgcgtgttctttcctctctgaagatagactcattatc 733
Query: 181 ctgacctcctttcagaaccaccaccgtgaacatcttacctttctttattattaattcctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 ctgacctcctttcagaaccaccaccgtgaacatcttacctttctttattattaattcctt 673
Query: 241 tcagtgtcatattaaagattttgttccagtaaaaatagtaataggtacttagccttgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 tcagtgtcatattaaagattttgttccagtaaaaatagtaataggtacttagccttgaaa 613
Query: 301 cctacttccaataaagaattatctatcacaaaggagaaaaaagtcgtcattactttaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 cctacttccaataaagaattatctatcacaaaggagaaaaaagtcgtcattactttaaat 553
Query: 361 agaattttagaaacaatcttcagttaaagcaacaatggttgaaaaaaatactctggctgt 420
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 agaattttagaaataatcttcagttaaagcaacaatggttgaaaaaaatactctggctgt 493
Query: 421 tttagcttcagtagtcctttctactagactccagctttgtaagcctctggtcactgcaaa 480
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 492 tttagcttcagtagtcctttctattagactccagctttgtaagcctctggtcactgcaaa 433
Query: 481 atagaacactatcagtctataataatagtaaccccaagcatgtgaatagcctgaaatact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 atagaacactatcagtctataataatagtaaccccaagcatgtgaatagcctgaaatact 373
Query: 541 ggggtgatggggcaggttggcagtgtccagaataactattatacacagcttagtgacatt 600
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ggggtgacggggcaggttggcagtgtccagaataactattatacacagcttagtgacatt 313
Query: 601 tctaaaattgaccaaaatcatgttgagggtcatatgtaattacttagctcacctgagtct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tctaaaattgaccaaaatcatgttgagggtcatatgtaattacttagctcacctgagtct 253
Query: 661 tttcatccattatgtcaaggcagagttcttgtctcctacatagaatttcatgcaaaacaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tttcatccattatgtcaaggcagagttcttgtctcctacatagaatttcatgcaaaacaa 193
Query: 721 aaacaaaacaaaacaacaacaacaacaaaacaaggtaagctgtggtcaactgttgatagc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 aaacaaaacaaaacaacaacaacaacaaaacaaggtaagctgtggtcaactgttgatagc 133
Query: 781 tatcttt 787
|||||||
Sbjct: 132 tatcttt 126
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 787
Length of database: 1187
Length adjustment: 10
Effective length of query: 777
Effective length of database: 1177
Effective search space: 914529
Effective search space used: 914529
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
