Query= MSMg01no126_f02.b1 MSMg01no126_f02.b1 CHROMAT_FILE:
MSMg01no126_f02.b1 PHD_FILE: MSMg01no126_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:39 2005
(356 letters)
>mm_chr13_25204589_25205344
Length = 756
Score = 613 bits (317), Expect = e-180
Identities = 344/353 (97%)
Strand = Plus / Plus
Query: 4 gaattctgtctgtgcccatgctatgtcagtcttagctctccactctcataggtctataga 63
|||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 204 gaattctgtctgtgtacatgccatgtcagtcttagctctccactctcatagttctataga 263
Query: 64 caagcagcacagtataactatagagacccagtgtaactggataaccgacccagggtcaca 123
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 264 caagcagcacagtataactacagagacccagtgtaactggataaccgacccagggtcaca 323
Query: 124 gggtcccaactcagcccttcacattccccgctattgtgctttgcaagtttgtatttgcta 183
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 324 gggtcccaactcagcccttcacgttccctgctattgtgctttgcaagtttgtatttgcta 383
Query: 184 gtacgaagtctgaaaagctaaaatttccactaaagatgtaaggtagttgctgctcggcag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtacgaagtctgaaaagctaaaatttccactaaagatgtaaggtagttgctgctcggcag 443
Query: 244 cacatgtctcacacacatgtttcattcatttgggattcttccttaggaaggctttctgca 303
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cacatgtctcagacacatgtttcattcatttgggattcttccttaggaaggctttctgca 503
Query: 304 accatgtgaatatccagaacgatgcctgactgtccaggtgtctgtctgaccgg 356
|||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 504 accatgtgaatatccagaacgatgcctgactgtccaggtgtctgtctgtccgg 556
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 756
Length adjustment: 9
Effective length of query: 347
Effective length of database: 747
Effective search space: 259209
Effective search space used: 259209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no126_f02.g1 MSMg01no126_f02.g1 CHROMAT_FILE:
MSMg01no126_f02.g1 PHD_FILE: MSMg01no126_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:39 2005
(554 letters)
>mm_chr13_25387570_25388523
Length = 954
Score = 975 bits (504), Expect = 0.0
Identities = 539/554 (97%), Gaps = 7/554 (1%)
Strand = Plus / Minus
Query: 1 tggacctaaggcagaaacctcacatgcagcaggctgatgggttttactctactggggctt 60
||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 565 tggacataaggcagaaacctcacatgcagcaggccgatgggttttactctactggggctt 506
Query: 61 gaaggtagtcctccttctccaaaagagagtctgagagaagagcctagctatagccaagct 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaaggtagtcctccttctccaatagagagtctgagagaagagcctagctatagccaagct 446
Query: 121 atagtctacagctgaaggctggactacacagcagaactctgcatctatcaggtttgcctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atagtctacagctgaaggctggactacacagcagaactctgcatctatcaggtttgcctg 386
Query: 181 ctctgttataaagagccaagtgggcctggactggctgcatcacaataaggtataaaatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctctgttataaagagccaagtgggcctggactggctgcatcacaataaggtataaaatga 326
Query: 241 gaccaatcaggagagatctgccagaccctgaggggagaaagaaagactgccaaaacttga 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaccaatcaggagagatctgccagaccctgaggggagaaagaaagactgccaaaacttga 266
Query: 301 gcatcttcgaaattaggatagctgctgccttcctccattttgcaagggaagcaaaaaaaa 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 265 gcatcttcgaaattaggatagctgctgccttcctccattttgcaagggaagc------aa 212
Query: 361 aaaaaaaaaaagtggggaattttgtgaggctttttaagtgttcttcactggcaggggttt 420
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 211 aaaaaaaaaaagtggggaatttt-tgaggctttttaagtgttcttcactggcaggggttc 153
Query: 421 gagcttgttctcttttgactgccagaacataacttccacctgccaaaattctgctgtgct 480
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 152 gagcttgttctcttttgactgccagaatgtaacttccacctgccaaaattctgctgtgct 93
Query: 481 gtcctggcctcaggggatcatgttcatccttacttctgctatatagctcatctctgataa 540
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 92 gtcctggcctcaggggatcatgttcatctttacttctgctatatagctcatctctgataa 33
Query: 541 gagactagcttccc 554
||||||||||||||
Sbjct: 32 gagactagcttccc 19
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space: 513536
Effective search space used: 513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
