Query= MSMg01no131_g17.b1 MSMg01no131_g17.b1 CHROMAT_FILE:
MSMg01no131_g17.b1 PHD_FILE: MSMg01no131_g17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:38 2005
(626 letters)
>mm_chr13_48607620_48608644
Length = 1025
Score = 1187 bits (614), Expect = 0.0
Identities = 623/626 (99%), Gaps = 1/626 (0%)
Strand = Plus / Plus
Query: 1 ggttttgaaacaaaaaagaaagataggtcacaaagataggtggactcggggacagaattt 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 ggttttgaaacaaaaaagaaagataggtcacaaagataggtggact-ggggacagaattt 259
Query: 61 tcagtggtgaatataatcaaaatgagttgtatatatagatcagagaactaaagagaaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tcagtggtgaatataatcaaaatgagttgtatatatagatcagagaactaaagagaaaag 319
Query: 121 gagaaaccaggctacaccgccagaaattcagggagccaacaagccctgggtcatggggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gagaaaccaggctacaccgccagaaattcagggagccaacaagccctgggtcatggggga 379
Query: 181 aatgtctcttcccattacatcactccaggctcttggaagatcccagagctcaagggagcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aatgtctcttcccattacatcactccaggctcttggaagatcccagagctcaagggagcc 439
Query: 241 acactaggtcattagcccacaatgtgtaaaaaggccacccccactcccccctacacacat 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 acacaaggtcattagcccacaatgtgtaaaaaggccacccccactcccccctacacacat 499
Query: 301 atacacacaggcacgcacgcgcacacacatacacaccacacacacaagccttgtcacaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atacacacaggcacgcacgcgcacacacatacacaccacacacacaagccttgtcacaca 559
Query: 361 ccaagactccaaacttcaagactagctccagtctcttggtctttgccgttgcattcagcc 420
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 560 ccaagactccaaacttcaagactagctctagtctcttggtctttgccgttgcattcagcc 619
Query: 421 aggcaattctgtatgttttccccgcaaggcaagcgaccaagctgtatttccaaattcatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aggcaattctgtatgttttccccgcaaggcaagcgaccaagctgtatttccaaattcatg 679
Query: 481 atgagtgcagctccccaagacttctgtcctcaccaattcagacatttgttcctgtggagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 atgagtgcagctccccaagacttctgtcctcaccaattcagacatttgttcctgtggagg 739
Query: 541 atggctctgatccctcacaaacctcaacagagagcgggggtggaaaggtgacatctagat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 atggctctgatccctcacaaacctcaacagagagcgggggtggaaaggtgacatctagat 799
Query: 601 gccccaggtccaatctccctgacctg 626
||||||||||||||||||||||||||
Sbjct: 800 gccccaggtccaatctccctgacctg 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1025
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1015
Effective search space: 625240
Effective search space used: 625240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no131_g17.g1 MSMg01no131_g17.g1 CHROMAT_FILE:
MSMg01no131_g17.g1 PHD_FILE: MSMg01no131_g17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:38 2005
(281 letters)
>mm_chr13_48761421_48762101
Length = 681
Score = 503 bits (260), Expect = e-147
Identities = 275/280 (98%)
Strand = Plus / Minus
Query: 1 gaagcccgctatcaagtcccccactgtgtcataaaatattttatccgaaaaaagagtcac 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 480 gaagcccgctatcaagtcccccactgtgtcataaaatattttattggaaaaaagagtcac 421
Query: 61 cgtctttgtaagagaggggtagaagcctcagcgacatggggaggccaggtatcagctgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 cgtctttgtaagagaggggtagaagcctcagcgacatggggaggccaggtatcagctgat 361
Query: 121 ctgctagagacgactctgctctgcagggcagggccatagggacctgcacccggtggcggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ctgctagagacgactctgctctgcagggcagggccatagggacctgcacccggtggcggg 301
Query: 181 gtccccaaggcacggaagtaagtgtgtgcctgccggtgtccgggcccagaaggccggctg 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gtccccaaggcgcggaagtaagtgtgtgcctgccggtgtccgggcccagaaggccggctg 241
Query: 241 gattccggggataaaagtgtgggcaaggagcggggcgtga 280
|| ||||||||||||||||||||||||||||||||||||
Sbjct: 240 gaggccggggataaaagtgtgggcaaggagcggggcgtga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
