Query= MSMg01no133_n15.b1 MSMg01no133_n15.b1 CHROMAT_FILE:
MSMg01no133_n15.b1 PHD_FILE: MSMg01no133_n15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:46 2005
(574 letters)
>mm_chr13_26506676_26507649
Length = 974
Score = 1075 bits (556), Expect = 0.0
Identities = 571/578 (98%), Gaps = 4/578 (0%)
Strand = Plus / Plus
Query: 1 actgttttcattactcagtcaaccttgggaaatcattaatacaggtgtggctttttccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 actgttttcattactcagtcaaccttgggaaatcattaatacaggtgtggctttttccaa 256
Query: 61 ttaatagttggtttcttaaggtaggatttcttagagagttttgttttattttattttgtt 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ttaatagtcggtttcttaaggtaggatttcttagagagttttgttttattttattttgtt 316
Query: 121 ttgttttgttttggttt----tttttttgctagctttttaaattacaggactttaagaaa 176
||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ttgttttgttttgttttgggttttttttgctagctttttaaattacaggactttaagaaa 376
Query: 177 gagttatcataaaatattcttttataaattccttcagaaagcctttgacagagcatatct 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gagttatcataaaatattcttttataaattccttcagaaagcctttgacagagcatatct 436
Query: 237 tcatctgaggcctgcttggcaaggaccttgtatctcagttacataccctaccagcagcct 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tcatctgaggcctgcttggcaaggaccttgtatctcagttacataccctaccagcagcct 496
Query: 297 tgcctctaggcctggatggattcatttccttcttctacttgctgatgatagcaaagaacc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tgcctctaggcctggatggattcatttccttcttctacttgctgatgatagcaaagaacc 556
Query: 357 caataagcatgtttgtgtggtttgtagtgttccactttatcctcttactcctgatgccta 416
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 caataagcatgtttgtgtgatttgtagtgttccactttatcctcttactcctgatgccta 616
Query: 417 tttcatgacatttctttagagccatgtcctataatgacaggggaataacaatgcacattg 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tttcatgacatttctttagagccatgtcctataatgacaggggaataacaatgcacattg 676
Query: 477 tactattctgagaaagtgaaattgtagtccacagaattgacaagaatggcatctttgact 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tactattctgagaaagtgaaattgtagtccacagaattgacaagaatggcatctttgact 736
Query: 537 cctgataagggctagattcctttatcatgttcttgatg 574
||||||||||||||||||||||||||||||||||||||
Sbjct: 737 cctgataagggctagattcctttatcatgttcttgatg 774
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space: 543696
Effective search space used: 543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no133_n15.g1 MSMg01no133_n15.g1 CHROMAT_FILE:
MSMg01no133_n15.g1 PHD_FILE: MSMg01no133_n15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:46 2005
(286 letters)
>mm_chr13_26680077_26680762
Length = 686
Score = 507 bits (262), Expect = e-148
Identities = 277/282 (98%)
Strand = Plus / Minus
Query: 1 ttgctttgatatatcttggtgttttacctttggcaaacagacattcgcccatgtcttcct 60
||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||
Sbjct: 482 ttgctttgatatatcttggtgttttacctctggcaaacagacatttgttcatgtcttcct 423
Query: 61 aggaaaagttagacatgcacacaggtgcacatacttattttctctcagacaccattgtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aggaaaagttagacatgcacacaggtgcacatacttattttctctcagacaccattgtcc 363
Query: 121 ccagctaccagacactagccatttaagcaaagattattagaaaaacctcgaagagaaact 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 362 ccagctaccagacactagccatttaagcaaagattattagaaaaaactcgaagagaaact 303
Query: 181 ttaccaggacactgcaactcaagaggaggtctgcaaataatagcttaggagttttatcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ttaccaggacactgcaactcaagaggaggtctgcaaataatagcttaggagttttatcct 243
Query: 241 ttacacatgacctttgcttccaaggtctccttcaaacaacat 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ttacacatgacctttgcttccaaggtctccttcaaacaacat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
