Query= MSMg01no134_f05.b1 MSMg01no134_f05.b1 CHROMAT_FILE:
MSMg01no134_f05.b1 PHD_FILE: MSMg01no134_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:49:37 2005
(327 letters)
>mm_chr13_55149142_55149868
Length = 727
Score = 571 bits (295), Expect = e-167
Identities = 319/327 (97%)
Strand = Plus / Minus
Query: 1 ggctggtcaagtaaggaattacatgaaacactttactgtgtgtggcctctacttggttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ggctggtcaagtaaggaattacatgaaacactttactgtgtgtggcctctacttggttct 468
Query: 61 cagcccctctgatctcttagtttctgccaccttgcccatgtccacggcttccttgttaga 120
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 467 cagcaaatctgatctcttagtttctgccaccttgcccatgtccatggcttccttgttaga 408
Query: 121 ggcagaaattggtgatgtttcttgttcctcttaccataatttctaaatcttggatagcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ggcagaaattggtgatgtttcttgttcctcttaccataatttctaaatcttggatagcag 348
Query: 181 gcttttcataccaaagagggagagtttcccatctcgagaatgggaataagccacaaaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gcttttcataccaaagagggagagtttcccatctcgagaatgggaataagccacaaaaca 288
Query: 241 gagcctggagaccatttatctaattcctgaggcttagatttttaggtttcttacctctca 300
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 287 gagcctggagaccatttatctaattcctgaggcttagagtaagaggtttcttacctctca 228
Query: 301 gttgaatacccaggtttctccctccct 327
|||||||||||||||||||||||||||
Sbjct: 227 gttgaatacccaggtttctccctccct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no134_f05.g1 MSMg01no134_f05.g1 CHROMAT_FILE:
MSMg01no134_f05.g1 PHD_FILE: MSMg01no134_f05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:49:37 2005
(328 letters)
>mm_chr13_54996539_54997269
Length = 731
Score = 578 bits (299), Expect = e-169
Identities = 322/331 (97%), Gaps = 3/331 (0%)
Strand = Plus / Plus
Query: 1 agcagtatgaagagccggggtagggtgttctcgaggaaactgctggataaatgtcagcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcagtatgaagagccggggtagggtgttctcgaggaaactgctggataaatgtcagcat 260
Query: 61 ggaccctgtgaggcccagcaagtactttctggaaactttcagactagattctgcgcagct 120
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagcatgtgaggcccagcaagtactttctggaaactttcagactagattctgcgcagct 320
Query: 121 gccctcaaagcaccttaaaggcacaccagagtttcctaaggtgagtccagcctgtgttct 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 gccctcaaagcaccttaaaggcacaccggagtttcctaaggtgagtccagcctgtgttct 380
Query: 181 ggcccctgtattccccggggatgctgggctcatcattgacagcccatgctcgctggagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcccctgtattccccggggatgctgggctcatcattgacagcccatgctcgctggagaa 440
Query: 241 ctggcgttcttaaggtttttgttattgtttgctgtagagtttatcctggcccccc---ag 297
|||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||
Sbjct: 441 ctggcgttcttaaggtttttgttattgtttgctgtagagtgaagcctggcccccccccag 500
Query: 298 aaagacaggatgttgggcaagcgagtggctg 328
|||||||||||||||||||||||||||||||
Sbjct: 501 aaagacaggatgttgggcaagcgagtggctg 531
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 731
Length adjustment: 9
Effective length of query: 319
Effective length of database: 722
Effective search space: 230318
Effective search space used: 230318
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
