Query= MSMg01no134_l03.b1 MSMg01no134_l03.b1 CHROMAT_FILE:
MSMg01no134_l03.b1 PHD_FILE: MSMg01no134_l03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:50:21 2005
(289 letters)
>mm_chr13_22095876_22096564
Length = 689
Score = 534 bits (276), Expect = e-156
Identities = 287/292 (98%), Gaps = 3/292 (1%)
Strand = Plus / Plus
Query: 1 agtttgtccaaaagcacacagacagaaaatggaatttggacattttatttcatgccacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtttgtccaaaagcacacagacagaaaatggaatttggacattttatttcatgccacta 260
Query: 61 ccctcacttgtcttcagaaagtgtaggaagaatgtagaattcaactctgatctgggtgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccctcacttgtcttcagaaagtgtaggaagaatgtagaattcaactctgatctgggtgtg 320
Query: 121 gtagcatatgcctgtcatgtcagcactctgaggctgaagcaggaggactgctgtgagttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtagcatatgcctgtcatgtcagcactctgaggctgaagcaggaggactgctgtgagttg 380
Query: 181 aaggtaaacctgggctacctggtaagactctgtccccaaaaagagaacaaaggcttaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 aaggtaaacctgggctacctggtaagactctgtccccaaaaagagaacaaaggcttagct 440
Query: 241 c---tgggatggaatgatcaaatttgacaaatgatacaggatacctatattt 289
| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 cctctgggatggaatgaccaaatttgacaaatgatacaggatacctatattt 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no134_l03.g1 MSMg01no134_l03.g1 CHROMAT_FILE:
MSMg01no134_l03.g1 PHD_FILE: MSMg01no134_l03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:50:21 2005
(332 letters)
>mm_chr13_22265097_22265828
Length = 732
Score = 627 bits (324), Expect = 0.0
Identities = 330/332 (99%)
Strand = Plus / Minus
Query: 1 aaactctaatttatgctgggcatgcatgtttttacccactagccctgtgtctctgactcc 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 aaactctaatttatgctaggcatgcatgtttttacccactagccctgtgtctctgactcc 473
Query: 61 agtccccgcatgaagagttctcagcaggcttgactcagttaccccaatatagaaatgtac 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 agtccctgcatgaagagttctcagcaggcttgactcagttaccccaatatagaaatgtac 413
Query: 121 aatatgactttctatgtcttatgatatgacaaaactgctattttggcttctgtaacttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 aatatgactttctatgtcttatgatatgacaaaactgctattttggcttctgtaacttgt 353
Query: 181 ttatgcagaggcctaaatattgttttgacttacttgacccacttacactagcagcacaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ttatgcagaggcctaaatattgttttgacttacttgacccacttacactagcagcacaga 293
Query: 241 ccattattgcttgcttatgtagagactgaaggtctacttgtgtcttttacatgaaaataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ccattattgcttgcttatgtagagactgaaggtctacttgtgtcttttacatgaaaataa 233
Query: 301 aaacctttcgcatacccttccctcagaacata 332
||||||||||||||||||||||||||||||||
Sbjct: 232 aaacctttcgcatacccttccctcagaacata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
