Query= MSMg01no136_g16.b1 MSMg01no136_g16.b1 CHROMAT_FILE:
MSMg01no136_g16.b1 PHD_FILE: MSMg01no136_g16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:47 2005
(239 letters)
>mm_chr13_53182200_53182838
Length = 639
Score = 418 bits (216), Expect = e-121
Identities = 231/238 (97%), Gaps = 4/238 (1%)
Strand = Plus / Plus
Query: 2 ggaattctggagtatgacatatggagggctagcaggctccttttcctagtctgtcacgca 61
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ggaattctggagtaggacctatggagggctagcaggctccttttcctagtctgtcacgca 261
Query: 62 cagcacggggcttacacagcccagggtgttctcaatggctccatcccactgcctcaggga 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cagcacggggcttacacagcccagggtgttctcaatggctccatcccactgcctcaggga 321
Query: 122 tcagtccttctgcgtgtcagtgtatttgtgtgctcgtgtgtgtgtgtgtgtgtgtgtgtg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tcagtccttctgcgtgtcagtgtatttgtgtgctcgtgtgtgtgtgtgtgtgtgtgtgtg 381
Query: 182 tgtgtgtatgtgagtgtgcatgtgtatgtacacgtgttgtttgtgcatgtgtgaatgt 239
||| ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 382 tgt----atgtgagtgtgcatgtgtatgtacatgtgttgtttgtgcatgtgtgaatgt 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no136_g16.g1 MSMg01no136_g16.g1 CHROMAT_FILE:
MSMg01no136_g16.g1 PHD_FILE: MSMg01no136_g16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:48 2005
(244 letters)
>mm_chr13_53363755_53364398
Length = 644
Score = 441 bits (228), Expect = e-128
Identities = 238/244 (97%), Gaps = 5/244 (2%)
Strand = Plus / Minus
Query: 1 tagagtgctgttctgcctcaggactgcctcccccccccccccccccccccccgttgaaca 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 491 tagagtgctgttctgcctcaggactgcct-----ccccccccccccccccccgttgaaca 437
Query: 61 gagggagaagggggtgagaagtttctgctttgacaagctctcctaatcccattattgtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gagggagaagggggtgagaagtttctgctttgacaagctctcctaatcccattattgtta 377
Query: 121 attatgagatagtctttgaagtcccctaatgctgcttttcatgcaaggccgagacaaaag 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 376 attatgagatagtctttgaagtcccctaatgatgcttttcatgcaaggccgagacaaaag 317
Query: 181 cattcatcagatttttgggcatttctttcagtcccttgccggagctttgttttgcttgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 cattcatcagatttttgggcatttctttcagtcccttgccggagctttgttttgcttgcc 257
Query: 241 aatt 244
||||
Sbjct: 256 aatt 253
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
