Query= MSMg01no136_l12.b1 MSMg01no136_l12.b1 CHROMAT_FILE:
MSMg01no136_l12.b1 PHD_FILE: MSMg01no136_l12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:11 2005
(637 letters)
>mm_chr13_4796260_4797296
Length = 1037
Score = 1193 bits (617), Expect = 0.0
Identities = 632/637 (99%)
Strand = Plus / Plus
Query: 1 gaggttcaaaaatatcagaaacatatgatctaccactgtgctatatctacaacaagaatt 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 gaggttcaaaaatatcagaaacatatgatctaccactctgctatatctacaacaagaatt 260
Query: 61 taatagatagctgtgatcatctgtgttcacagtacctttattactttgtatcctgaatta 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 taatagatagctgtgatcatctgtgttcacagtacatttattactttgtatcctgaatta 320
Query: 121 cacaactccatttattaaactcatgtggtcttaataaaccctcaaaaatctgtgcttgct 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacaacaccatttattaaactcatgtggtcttaataaaccctcaaaaatctgtgcttgct 380
Query: 181 catttgtctcatggttttcccgctgtgaatagacatcatgatcaaggcaagtcttataaa 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catttgtctcatggttttcctgctgtgaatagacatcatgatcaaggcaagtcttataaa 440
Query: 241 aaaacaacatttaattggggctggcttacaagttcagaggttcagtccattatcatcaag 300
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 aaaacaacatttaattggggctggcttacaggttcagaggttcagtccattatcatcaag 500
Query: 301 gtgggagcatgtcagcatccaggctgtcatggcgcaggcagagctgagagttctatgtct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgggagcatgtcagcatccaggctgtcatggcgcaggcagagctgagagttctatgtct 560
Query: 361 tcatccaaaggctgctagtggaagactgacttccaggcaacaagggtaagagtcttaagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcatccaaaggctgctagtggaagactgacttccaggcaacaagggtaagagtcttaagt 620
Query: 421 ccacacctgttctggctggcctgcggctctcatgtccaggttcaagcctgggaggcatct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccacacctgttctggctggcctgcggctctcatgtccaggttcaagcctgggaggcatct 680
Query: 481 tggagctgaaagaaaagagggaatctaggtgggtagagagagagatggaaccaagatagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tggagctgaaagaaaagagggaatctaggtgggtagagagagagatggaaccaagatagg 740
Query: 541 attctgatcaaggctcaactttaatggcggtggacacactttataaaggagaggggaggc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 attctgatcaaggctcaactttaatggcggtggacacactttataaaggagaggggaggc 800
Query: 601 ccatttccagtcacgccaagtttcttgtgaagttgac 637
|||||||||||||||||||||||||||||||||||||
Sbjct: 801 ccatttccagtcacgccaagtttcttgtgaagttgac 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_l12.g1 MSMg01no136_l12.g1 CHROMAT_FILE:
MSMg01no136_l12.g1 PHD_FILE: MSMg01no136_l12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:12 2005
(636 letters)
>mm_chr13_4953251_4954286
Length = 1036
Score = 590 bits (305), Expect = e-172
Identities = 311/313 (99%)
Strand = Plus / Minus
Query: 1 tgtcgattcatgagttatgtagagatgtacctttgtagctttctatcattattctgcctc 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tgtcgattcatgagttttgtagagatgtacctttgtagctttctatcattattctgcctc 254
Query: 61 cactccataaatagactattatcaactactgtaggcttgttaaaaatccaatggtcttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cactccataaatagactattatcaactactgtaggcttgttaaaaatccaatggtcttag 194
Query: 121 tcagggtttcttttcctgcacaaaaaatcatgaccaaagagcaagttggggagaaataac 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tcagggtttcttttcctgcacaaaaaatcatgaccaaagagcaagttggggagaaataag 134
Query: 181 tttattcaatttacatgtccacattgctgtttatcaccaggactgaagtcaggactgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tttattcaatttacatgtccacattgctgtttatcaccaggactgaagtcaggactgaaa 74
Query: 241 ctcaagcagttcaggaagcaggagctgatacagaagccatggagggatattattaactgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 ctcaagcagttcaggaagcaggagctgatacagaagccatggagggatattattaactgg 14
Query: 301 cttgcttcccgta 313
|||||||||||||
Sbjct: 13 cttgcttcccgta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
