CTCCCCNTCTCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXTGCGNAA
ATCCGCGGAATTCCAGCCTTAGTTCCCTAACAAGTCACACTCCTCTCAAT
CTACCTATATGTATTTAAATATTTTAAAAGATGTATTACATTTATAGTTA
CATGTTTTGCCTGCATGTATGACTGCATTACCTAGGTGTAGTGCCCCCAG
AGGCCAGAATAAGGAGCCAGATCCTCTGAACTGGTGCTGCAAACTGAAAG
AGGAACCTACAATAGCAGCAAGTGCTCTTAACTACTGAGCCACCTCTCCA
GCTCCTTCTGCATCTTTCCAAGGAGTAACTTACAGAAAAGCATAATAAAA
TCATAAGCAGTAATACATGGATGTAGACTACCACACTAACTTTTAAATTT
TGCTTTTCAAAAGTAAAAATACAATTTTGTATTATGTAGCCCTGGTTGAC
TTGGAACTCAATATGTAGACCACGCTGGCCTCAAACTCTGAGATCCACCT
GTCAGTGCCTCCTGAGTACTAGTATTAAAGGTACACAGCACTACACCCAG
AGAATAATGTATAAATGCCTATGATACTCATTTCCTGCTCCTGTCTGCTG
GAAATACCTTTAAGGGCCACCTGCCATCATTTTGTTATGGGGATACAACG
GTGTTTTTCAGTTTACGGCTATTATATCAGCTAGAGATAACTATTAAGCA
AGAACTT

TTCTTNNTTCGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCCCTGGGATGAAGCCA
ATTTGATCATAGTGAATGATCTTTTTAATGTGTTCTTGGATTTGGTTTGT
GATTATTTTATTAGGAATTTTGTTCTGTAATTTTCTTCCTTTTATGACCA
AAATATGGTTTAGATATTAGGCTAATTCTGGATTGATAAAAAGAATTGGG
CAGTATTCTTTCTGTACCAGTTTTGTAGAATAACTTGAGGAATATTGGCA
TTCATTCTACTTGGAAATTCTGCTTTAAAAACCATCTGGTCCTGGAATTT
TTTGGCCGTTAGATTTTAATTACTGCTTATATGTTCCTAGGGATTATATT
TCTGTTGAAATTGCTTATATGATCTTGATTTGACTTAGGTACATGGTATA
TGTCAAGAAAATGTTCCATTTCTTTTAGATTTTCTAAGTTGGTGGTATAT
AAGTTCTCAAAATACATCCTTTTGATTCTCTCGGTTTCTGTGGTGGCTAT
TATATCCCTCTTTTGTTCTTTAATTTTGTTAATTTGAATCTCCACTCTTC
ATGTTTAAGGGTTTGGCAATTTTATTGATTTTGTTGAAGAACCACTCTTA
TTTCCACCAAAAGTTTATTTCTTGACATCTACTCCCAAAAGGGTATGATT
TCTTCTT

Query= MSMg01no138_f21.b1 MSMg01no138_f21.b1 CHROMAT_FILE:
MSMg01no138_f21.b1 PHD_FILE: MSMg01no138_f21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:23 2005
         (627 letters)



>mm_chr13_32892569_32893595
          Length = 1027

 Score = 1067 bits (552), Expect = 0.0
 Identities = 612/634 (96%), Gaps = 9/634 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   caagtcacactcctctcaatctacctatatgtatttaaatattttaaaagatgtattaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 caagtcacactcctctcaatctacctatatgtatttaaatattttaaaagatgtattaca 255

                                                                       
Query: 61  tttatagttacatgttttgcctgcatgtatgactg--cattacctaggtgtagtgccccc 118
           |||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 256 tttatatttacatgttttgcctgcatgtatgactgtgcattacctaggtgtagtgccccc 315

                                                                       
Query: 119 agaggccagaataaggagccagatcctctgaactggtgctgcaaactgaaagaggaacct 178
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 316 agaggccagaataaggagccagatcctctgacctggtgctgcaaactgaaagaggaacct 375

                                                                       
Query: 179 acaatagcagcaagtgctcttaactactgagccacctctccagctccttctgcatctttc 238
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 376 acaatagcagcaagtgctcttaactactgagccacctctccagctccttttgcatctttc 435

                                                                       
Query: 239 caaggagtaacttacagaaaagcataataaaatcataagcagtaatacatggatgtagac 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 caaggagtaacttacagaaaagcataataaaatcataagcagtaatacatggatgtagac 495

                                                                       
Query: 299 taccacactaactttt-aaattttgcttttcaaaagtaaaaatacaattttgtattatgt 357
           |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 496 taccacactaactttttaaattt-gcttttcaaaagtaaaaatacaattttgtattatgt 554

                                                                       
Query: 358 agccctggttgacttggaactcaatatgtagaccacgctggcctcaaactctgagatcca 417
           |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 555 agccctggctgacttggaactcaaaatgtagaccacgctggcctcaaactctgagatcca 614

                                                                       
Query: 418 cctgtcagtgcctcctgagtactagtattaaaggtacacagcactacacccagagaata- 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 615 cctgtcagtgcctcctgagtactagtattaaaggtacacagcactacacccagagaatat 674

                                                                       
Query: 477 --atgtataaatgcctat-gatactcatttcctgctcctgtctgctggaaatacctttaa 533
             || ||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 675 acatttataaatgcctattg-tactcatttcctgctcctgtctgctggaaatacctttaa 733

                                                                       
Query: 534 gggccacctgccatcattttgttatggggatacaacggtgtttttcagtttacggctatt 593
           || |  ||||||||||||||||||| |||||||||||||| ||||||||||||| |||||
Sbjct: 734 ggactgcctgccatcattttgttattgggatacaacggtgattttcagtttacgactatt 793

                                             
Query: 594 atatcagctagagataactattaagcaagaactt 627
           ||||||||||||||||||||||||||||| ||||
Sbjct: 794 atatcagctagagataactattaagcaagtactt 827


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space:   627489
Effective search space used:   627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)