CTTTCCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCCAGGCAGAAACCGACCTGAAAACAACAGTCCTCCTCA
TACCCAGCTCTGATCCCTATGCACCACAAAAATAATCAGCATGGAAGAAT
AACCCTACAGATGCAGTAATGCCATGCATACATTGTTGGTAACCTACAAC
TTTCTAACTGGACTTAAAACCTACTCAATACGAGGGAAGACATGCCTGGT
GTTTGAAACCTAGCCAACTACCCACAAGTAAAGTTATGGGTTGTGAAGGA
GAACTTACAACTGGCACTTTACTATACCAGCATAATCTCTAACTACATTT
AAATATTTCTTCTTATACTCACGGATAAGTGCAGTTCTCAGCCCTCATGA
AGGAAGCTTCTCTTTTCTTTTTTTTTTATTTTGTTTTTTTATTAGGCATT
TATGTCATTTACATTTCTAATGCTATCCCAAAAGTCCCCCACCCACTCCC
CCACCCACCCACTCCCACTTCTTGGCCCGGGTGTTCCCCTATACTGAGGC
AGATAAAGTTTGCAAGACCAATGGGCCTCTCTTTCCACTGATGGCCAACA
AGGCCATCTTCTGATACATATGCAGCTAGAGACACGATCTCTGGGGGTTA
CTGGGTAGTTCATATTGCTGTTCCCCCTATAGGATTGCAGATCCCTTCAC
CTCCTTTGTTAACTTTA

CTTTTCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTTTGAAGGAAAACTAGAGAT
TAACATGTAGATCTGATTGTAGGCTCAATAATATTGCTTCAAAGTGGCTT
AAGTAGAACAGCATTTTCCTTCACTAAACCTTAAAATTCTTCATACTATG
AGGAGAAATATTGGTCAAGTTATGAGTTGCCAAAAGGAAGTCCATGTTTT
ACCATTGAATATAAAGTTTATTTTCTTCCTTAAAATACATCAGAGTTTTT
TAAAGACCAAATAGGAAAAGAATGTGTACCTAAATACATAGATATGTCCC
ACATATACATAGCTTCTTACTGACTACTATGTCCACTGCTGTTCATTTCA
TGCAATCTCCAGACAACATGTGCAAAATGTGTCTGTCTATTCTGTGCCTG
TATAGACAGTAGTTGCTCTATATGTGCTGGTCTACATAAAAGTTTGTAAA
AATTTTTGTGATACAAATTTATCATGTTCAAAATATTCAAAACTTTGCAA
TAAATATTTTTAAGTGCTCCAAGCTTATTTGTGTCTGTAAATCTCTGCTG
GTGTATAATACATACTTGTGTGTAAGGTTGGCTTTACTTCATTAAGGACA
ATTGATTTTAAGTGCTAATGTCTTTAGNTTATAGGCACCCTGCCAATTTT
GAATACAAAAGAG

Query= MSMg01no138_n05.g1 MSMg01no138_n05.g1 CHROMAT_FILE:
MSMg01no138_n05.g1 PHD_FILE: MSMg01no138_n05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:59 2005
         (525 letters)



>mm_chr13_78307602_78308527
          Length = 926

 Score =  978 bits (506), Expect = 0.0
 Identities = 521/526 (99%), Gaps = 1/526 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtttgaagg-aaaactagagattaacatgtagatctgattgtaggctcaataatattgc 59
           |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtttgaaggcaaaacgagagattaacatgtagatctgattgtaggctcaataatattgc 260

                                                                       
Query: 60  ttcaaagtggcttaagtagaacagcattttccttcactaaaccttaaaattcttcatact 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcaaagtggcttaagtagaacagcattttccttcactaaaccttaaaattcttcatact 320

                                                                       
Query: 120 atgaggagaaatattggtcaagttatgagttgccaaaaggaagtccatgttttaccattg 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgaggagaaatattggtcaagttatgagttgccaaaaggaagtccatgttttaccattg 380

                                                                       
Query: 180 aatataaagtttattttcttccttaaaatacatcagagttttttaaagaccaaataggaa 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatataaagtttattttcttccttaaaatacatcagagttttttaaagaccaaataggaa 440

                                                                       
Query: 240 aagaatgtgtacctaaatacatagatatgtcccacatatacatagcttcttactgactac 299
           |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct: 441 aagaatgtgtacctaaatacatagatttgtcccacatatacatagcttcttactgactgc 500

                                                                       
Query: 300 tatgtccactgctgttcatttcatgcaatctccagacaacatgtgcaaaatgtgtctgtc 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatgtccactgctgttcatttcatgcaatctccagacaacatgtgcaaaatgtgtctgtc 560

                                                                       
Query: 360 tattctgtgcctgtatagacagtagttgctctatatgtgctggtctacataaaagtttgt 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tattctgtgcctgtatagacagtagttgctctatatgtgctggtctacataaaagtttgt 620

                                                                       
Query: 420 aaaaatttttgtgatacaaatttatcatgttcaaaatattcaaaactttgcaataaatat 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaaatttttgtgatacaaatttatcatgttcaaaatattcaaaactttgcaataaatat 680

                                                         
Query: 480 ttttaagtgctccaagcttatttgtgtctgtaaatctctgctggtg 525
           |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 681 ttttaagtgctccaagcttatttgcgtctgtaaatctctgctggtg 726


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 926
Length adjustment: 10
Effective length of query: 515
Effective length of database: 916
Effective search space:   471740
Effective search space used:   471740
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)