Query= MSMg01no141_p23.b1 MSMg01no141_p23.b1 CHROMAT_FILE:
MSMg01no141_p23.b1 PHD_FILE: MSMg01no141_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:01:04 2005
(397 letters)
>mm_chr13_65109590_65110386
Length = 797
Score = 698 bits (361), Expect = 0.0
Identities = 383/397 (96%), Gaps = 12/397 (3%)
Strand = Plus / Plus
Query: 1 gcatgtattaaacaactaacgttcttggacctgtaaatgtgagtttcaaatcatatgagc 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 gcatgtattaaacaactaacgttcttggaactgtaaatgtgagtttcaaatcatatgagc 260
Query: 61 atttgggaaacttgcccaagtttccagatcttcaaaggctcaaactgttttaccagttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttgggaaacttgcccaagtttccagatcttcaaaggctcaaactgttttaccagttct 320
Query: 121 ctcagccccaaagctgaaatgcagtggttctgagtgacctcatctccactcagtagctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcagccccaaagctgaaatgcagtggttctgagtgacctcatctccactcagtagctgc 380
Query: 181 tttttctaatggtgcactgtacctttgaaacactttggtaattagaaaaaagagagagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttttctaatggtgcactgtacctttgaaacactttggtaattagaaaaaagagagagag 440
Query: 241 aaagagagaaagagagaaagaaagaaagagagagaaagaaagaaaagaaaaaagaaagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaagagagaaagagagaaagaaagaaagagagagaaagaaagaaaagaaaaaagaaagaa 500
Query: 301 agaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagagagag 360
||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 501 agaaagaaagaaagaaagaaagaaagaaagaaagaaaga--ga----------gagagag 548
Query: 361 agagagagagagagagagagggagggagggagggagg 397
|||||||||||||||| ||||||||||||||||||||
Sbjct: 549 agagagagagagagagggagggagggagggagggagg 585
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 166
Number of extensions: 41
Number of successful extensions: 41
Number of sequences better than 10.0: 1
Number of HSP's gapped: 39
Number of HSP's successfully gapped: 1
Length of query: 397
Length of database: 797
Length adjustment: 9
Effective length of query: 388
Effective length of database: 788
Effective search space: 305744
Effective search space used: 305744
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no141_p23.g1 MSMg01no141_p23.g1 CHROMAT_FILE:
MSMg01no141_p23.g1 PHD_FILE: MSMg01no141_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:01:04 2005
(648 letters)
>mm_chr13_65260162_65261209
Length = 1048
Score = 1100 bits (569), Expect = 0.0
Identities = 575/577 (99%)
Strand = Plus / Minus
Query: 72 ctagctattctttttttttttaaagatttatttatttttattatatgtaagtacactgta 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 ctagctattctttttttttttaaagatttatttatttttattatatgtaagtacactgta 989
Query: 132 gctgtcttcagacactccagaagagggagtcagatctcattatggatggttgtgagccac 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988 gctgtcttcagacactccagaagagggagtcagatctcattatggatggttgtgagccac 929
Query: 192 catgtggttgctgggatttgaacttcggacctttgaaagagcagtcgatgctcttaccca 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 catgtggttgctgggatttgaacttcggacctttgaaagagcagtcgatgctcttaccca 869
Query: 252 ctgagccatctcaccagcccacatctagctattctagaggggatcaccatgcatacttta 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 ctgagccatctcaccagcccacatctagctattctagaggggatcaccatgcatacttta 809
Query: 312 ggtgctggtactggataaccttcttcccccaggtctcatggctagcagcattggtctttg 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 ggtgctggtactggataaccttcttcccccaggtctcatggctagcagcattggtctttg 749
Query: 372 caatactgaaaataaacagcccttggaaatgcctaagacactttgaagtccaatttttct 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 caatactgaaaataaacagcccttggaaatgcctaagacactttgaagtccaatttttct 689
Query: 432 cagggttgcttggctaaccaaccccttccctctttccagtctctttctctgtcttcctgg 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 cagggttgcttggctaaccaaccccttccctctttccagtctctttctctgtcttcctgg 629
Query: 492 ccaaaggtctttaagcacacctctccctatgaacagctgcacatagtctaaagcctgaag 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ccaaaggtctttaagcacacctctccctatgaacagctgcacatagtctaaagcctgaag 569
Query: 552 ctgcaagtctatctccagactctatgtatttttttttcttctagtgaattcatcagaact 611
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ctgcaagcctatctccagactctatgtatttttttttcttctagtgaattcatcagaact 509
Query: 612 ttccaaagtacctttctctctctgatcctttttatta 648
| |||||||||||||||||||||||||||||||||||
Sbjct: 508 tcccaaagtacctttctctctctgatcctttttatta 472
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
