Query= MSMg01no143_l23.b1 MSMg01no143_l23.b1 CHROMAT_FILE:
MSMg01no143_l23.b1 PHD_FILE: MSMg01no143_l23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:23 2005
(368 letters)
>mm_chr13_22092327_22093096
Length = 770
Score = 659 bits (341), Expect = 0.0
Identities = 360/367 (98%), Gaps = 2/367 (0%)
Strand = Plus / Minus
Query: 4 ggaattccaggtgcttgccagacatgtccttataggaagaggggaaattaaacctgtaag 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ggaattccaggtgcttgctagacatgtccttataggaagaggggaaattaaacctgtaag 620
Query: 64 ttggccaccaggctagtgtctacttaaacagtggtggaggtgggagttgtaaggctatgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ttggccaccaggctagtgtctacttaaacagtggtggaggtgggagttgtaaggctatgt 560
Query: 124 gcctctgggcatgcaggccagatcagggagggagtaattcttactcctgccagtctcaag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 559 gcctctgggcatgcaggccagatcagggagggagtaattcttactcctgccagtctcgag 500
Query: 184 atgagatgtccagggtgacatgtctggacctcactcttactggtttaaaaaagctt--aa 241
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 499 atgagatgtccagggtgacatgtctggacctcactcttactggtttaaaaaagctttaaa 440
Query: 242 aaaaaataaaaaatctcaagcacagcctccctcttttctcttcctgttcctagaggcaag 301
|||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 439 aaaaaataaaaaatctcaagcacagcctccctcttttcccaacctgttcctagaggcaag 380
Query: 302 tctcccagacttgcaaaaccaataatttaatgaaaccacatcaactgaaagaggacgact 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tctcccagacttgcaaaaccaataatttaatgaaaccacatcaactgaaagaggacgact 320
Query: 362 gtagagg 368
|||||||
Sbjct: 319 gtagagg 313
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 770
Length adjustment: 9
Effective length of query: 359
Effective length of database: 761
Effective search space: 273199
Effective search space used: 273199
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_l23.g1 MSMg01no143_l23.g1 CHROMAT_FILE:
MSMg01no143_l23.g1 PHD_FILE: MSMg01no143_l23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:23 2005
(631 letters)
>mm_chr13_21958859_21959889
Length = 1031
Score = 1197 bits (619), Expect = 0.0
Identities = 628/631 (99%)
Strand = Plus / Plus
Query: 1 tttagaacatatcacctgtaattcaacgtaagcccagttttatgaattatgaaatctaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttagaacatatcacctgtaattcaacgtaagcccagttttatgaattatgaaatctaaa 260
Query: 61 acctgctatcaggtaaagctcaatacatcatgagttataagccacatgctagtgtaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acctgctatcaggtaaagctcaatacatcatgagttataagccacatgctagtgtaaagt 320
Query: 121 tgtcagagtgtcataagccaggcagagtgtggcatcacttgtgatgccaggtactagcgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtcagagtgtcataagccaggcagagtgtggcatcacttgtgatgccaggtactagcgg 380
Query: 181 cctacagtgggaaggttgcaagtttaaagctcctgagacacatggtgaatttaagactag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctacagtgggaaggttgcaagtttaaagctcctgagacacatggtgaatttaagactag 440
Query: 241 cctgatctctgtagcaagaccatgtcttaaagagaaatatccaagcatctaaatgctgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctgatctctgtagcaagaccatgtcttaaagagaaatatccaagcatctaaatgctgag 500
Query: 301 cagtttcatggtagaaacagctctaaatcctttgcatgtgtgctcgctcaataatcccac 360
|||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||
Sbjct: 501 cagtttcatggtagaaacagctctaaatcctttgcatgtgtgtttgttcaataatcccac 560
Query: 361 tatgacctgtgagatgagcttactctgatttcctttttctgtatggggggcttacgtatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatgacctgtgagatgagcttactctgatttcctttttctgtatggggggcttacgtatg 620
Query: 421 gagagaataaagcagtgggtagcaacagagtttaaagtaggattagaatccaaattgcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagagaataaagcagtgggtagcaacagagtttaaagtaggattagaatccaaattgcag 680
Query: 481 taagttctaatttagaatggttactttggccaactgtgctggatggtcaacttgaagtga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taagttctaatttagaatggttactttggccaactgtgctggatggtcaacttgaagtga 740
Query: 541 gttaaagtcatctgagaggagggatcctcaactgaaacaatttctccataagatctggtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gttaaagtcatctgagaggagggatcctcaactgaaacaatttctccataagatctggtt 800
Query: 601 gtaggcaatcctgtagggcattttccttaat 631
|||||||||||||||||||||||||||||||
Sbjct: 801 gtaggcaatcctgtagggcattttccttaat 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
