Query= MSMg01no145_e15.b1 MSMg01no145_e15.b1 CHROMAT_FILE:
MSMg01no145_e15.b1 PHD_FILE: MSMg01no145_e15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:20 2005
(555 letters)
>mm_chr13_38322624_38323577
Length = 954
Score = 920 bits (476), Expect = 0.0
Identities = 527/552 (95%), Gaps = 15/552 (2%)
Strand = Plus / Plus
Query: 4 gaattcacactgatt-cacaggagagttattccttcaaaaatgggttatcagcatggctg 62
||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 216 gaattcacactgatttcacaggagagttattccttcaaaaatgg-------------ctg 262
Query: 63 gctgtgttgtgtcttgcacgttcaacataccgcttggtttctctctgcccatctgccagt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gctgtgttgtgtcttgcacgttcaacataccgcttggtttctctctgcccatctgccagt 322
Query: 123 tgtaatgcaaccttaactagctttcatctcaatgggactatgctacttgagttttgcaac 182
||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 323 tgtaatgtaaccttaactagctctcatctcaatgggaccatgctacttgagttttgcaac 382
Query: 183 agccagaatcatgagccaaattgctactttctaaatagcccagcctctggtattttgtga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 agccagaatcatgagccaaattgctactttctaaatagcccagcctctggtattttgtga 442
Query: 243 tagtaacagaaaatagactaacatagtgtgtccttccccccaccccattagttcagcaat 302
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 443 tagtaacagaaaatagactaacataatgtgtccttccccc-accccattagttcagcaat 501
Query: 303 ttgctgccattaggcagatggacttgctgacttctccacaaagcacgatactcactttct 362
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 502 ttgctgccattaggcagatggacttgcagacttctccacaaagcatgatactcactttct 561
Query: 363 cctgactcccaacatctcccgtgtcccctttcactctatccgaacatttgcttccttacc 422
||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 562 cctgacttgcaatatctcccgtgtcccctttcactctacccgaacatttgcttccttacc 621
Query: 423 caactttgctaaaacctgtagcaccacctctaccttgcagataacactgactgggtataa 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 caactttgctaaaacctgtagcaccacctctaccttgcagataacactgactgggtataa 681
Query: 483 ctgctgttctagtttggaagttacacacgccaaaggccaatatgttaaaaggcctccttc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ctgctgttctagtttggaagttacacacgccaaaggccaatatgttaaaaggcctccttc 741
Query: 543 ctgtatagctca 554
||||||||||||
Sbjct: 742 ctgtatagctca 753
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 954
Length adjustment: 10
Effective length of query: 545
Effective length of database: 944
Effective search space: 514480
Effective search space used: 514480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no145_e15.g1 MSMg01no145_e15.g1 CHROMAT_FILE:
MSMg01no145_e15.g1 PHD_FILE: MSMg01no145_e15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:20 2005
(238 letters)
>mm_chr13_38470028_38470665
Length = 638
Score = 422 bits (218), Expect = e-122
Identities = 233/238 (97%)
Strand = Plus / Minus
Query: 1 aatcaaaaccacacatatttaggacatcggataattctacttacaacctcctctattagg 60
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 438 aatcaaaaccacacatatttaggacatcggataattctacttacaaattcctctattagg 379
Query: 61 atttgctgtagtttgaatgtggcttgacccagcaaaactcatatttgagcttcaattgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 atttgctgtagtttgaatgtggcttgacccagcaaaactcatatttgagcttcaattgcc 319
Query: 121 cactgtactggcaatgaactcggaggacctttaaaaggtatttagaggcacccccttgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 318 cactgtactggcaatgaactcggaggacctttaaaaggtatttagaggcacccccatgaa 259
Query: 181 tggacccacattctttttctgagtcagtgctagtactcttaagattggcttaggcatg 238
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 258 tggacccacattctttttctgagtcagtgctagtactcttaagattgggttaggcatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
