Query= MSMg01no145_k15.b1 MSMg01no145_k15.b1 CHROMAT_FILE:
MSMg01no145_k15.b1 PHD_FILE: MSMg01no145_k15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:49 2005
(369 letters)
>mm_chr13_35787942_35788714
Length = 773
Score = 629 bits (325), Expect = 0.0
Identities = 357/369 (96%), Gaps = 4/369 (1%)
Strand = Plus / Minus
Query: 5 gaattcatgatattcccagacagacatgctaaacatgagaggacactgtgtttgggtaaa 64
|||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 573 gaattcatgatatttacagtcagacatgctaaacatgagaggacactgtgtttggctaat 514
Query: 65 gaagaaaggaggatcgtaatgaagaggg-ttttttcaggagaagggaaaaagggctacat 123
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 513 gaagaaaggaggatcgtaatgaagagggtttttttcaggagaagggaaaaagggctacat 454
Query: 124 atcaaacttgatctgtttttttctttctcatttccctagatgataa---cttcttcttct 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 453 atcaaacttgatctgtttttttctttctcatttccctagatgataacttcttcttcttct 394
Query: 181 cccctcctttctatgtttaaagaccataatgcacacttgaaaataccaattatgactgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 cccctcctttctatgtttaaagaccataatgcacacttgaaaataccaattatgactgtg 334
Query: 241 cagctacagtgacttccctcctgaagaaacgagactgattgtgcacatgattagtaattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 333 cagctacagtgacttccctcctgaagaaacgagactgattgtgcacatgattagtgattg 274
Query: 301 tgtaacactgaataattagcacacagcattccttcctctgaggaaaaaaccaaaaactcc 360
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 273 tgtaacactgaataattagcacgcagcattccttactctgaggaaaaaaccaaaaactcc 214
Query: 361 aagagcctg 369
|||||||||
Sbjct: 213 aagagcctg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 773
Length adjustment: 9
Effective length of query: 360
Effective length of database: 764
Effective search space: 275040
Effective search space used: 275040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no145_k15.g1 MSMg01no145_k15.g1 CHROMAT_FILE:
MSMg01no145_k15.g1 PHD_FILE: MSMg01no145_k15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:49 2005
(175 letters)
>mm_chr13_35640341_35640915
Length = 575
Score = 327 bits (169), Expect = 3e-94
Identities = 172/173 (99%)
Strand = Plus / Plus
Query: 1 aaacataacaattactgcttgtagccacctcaccaccccaccactccctttgacctctta 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 aaacataacaattactgcttgtagccacctcaccaccccagcactccctttgacctctta 260
Query: 61 ataagcctttccagtctcattatctctagattcaacttcccctagaccagtctctctgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataagcctttccagtctcattatctctagattcaacttcccctagaccagtctctctgta 320
Query: 121 caattacactgcctcaagacactggagaggaagcccctgctcccttttaaatg 173
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caattacactgcctcaagacactggagaggaagcccctgctcccttttaaatg 373
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 175
Length of database: 575
Length adjustment: 8
Effective length of query: 167
Effective length of database: 567
Effective search space: 94689
Effective search space used: 94689
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
