Query= MSMg01no147_d04.b1 MSMg01no147_d04.b1 CHROMAT_FILE:
MSMg01no147_d04.b1 PHD_FILE: MSMg01no147_d04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:43 2005
(228 letters)
>mm_chr13_51976290_51976917
Length = 628
Score = 402 bits (208), Expect = e-117
Identities = 220/224 (98%)
Strand = Plus / Minus
Query: 5 ggaattccttagcagctcccaatggccatggagtggtggagactcggctgagaataaact 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ggaattccttagcagctaaaaatggccatggagtggtggagactcggctgagaataaact 369
Query: 65 gagccctgtgagtgcacacctactcactggcatgcagaagaggaggttgtctgagtgtga 124
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gagccctgtgggtgcacacctactcactggcatgcagaagaggaggttgtctgagtgtga 309
Query: 125 gaagcagagtacctgagactcctgtccctgttgtctataacctgactatacccttcagga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gaagcagagtacctgagactcctgtccctgttgtctataacctgactatacccttcagga 249
Query: 185 ctgtcctgggatcatgcccatggacatctccagacactgtcaaa 228
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ctgtcctgggatcatgcccatggacatctccagacactgtcaaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 228
Length of database: 628
Length adjustment: 9
Effective length of query: 219
Effective length of database: 619
Effective search space: 135561
Effective search space used: 135561
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no147_d04.g1 MSMg01no147_d04.g1 CHROMAT_FILE:
MSMg01no147_d04.g1 PHD_FILE: MSMg01no147_d04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:43 2005
(163 letters)
>mm_chr13_51826661_51827221
Length = 561
Score = 296 bits (153), Expect = 5e-85
Identities = 160/163 (98%), Gaps = 2/163 (1%)
Strand = Plus / Plus
Query: 1 cagaggacctgtccctggagagtcccagaaggggtccaggagctccggagtggctgcctg 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 cagaggacctgtccctggagagtcccaggaggggtccaggagctccggagtggctgcctg 260
Query: 61 acacaaagctgttgtcccagctctggtgttcccaggcctcagagagtatccccagagcca 120
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 acacaaagctgttgtcccagctctggtgttcccaggcctcagag--tatccccagagcca 318
Query: 121 agatttccagttggcagggacgtgccctactgtagttacattg 163
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 agatttccagttggcagggacgtgccctactgtagttacattg 361
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 163
Length of database: 561
Length adjustment: 8
Effective length of query: 155
Effective length of database: 553
Effective search space: 85715
Effective search space used: 85715
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
