Query= MSMg01no148_c08.b1 MSMg01no148_c08.b1 CHROMAT_FILE:
MSMg01no148_c08.b1 PHD_FILE: MSMg01no148_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:57 2005
(612 letters)
>mm_chr13_25956887_25957898
Length = 1012
Score = 994 bits (514), Expect = 0.0
Identities = 583/606 (96%)
Strand = Plus / Plus
Query: 4 ggaattctctaaatcaaccaggactctcaattgctctcccaagaatgatcaatgagtcta 63
||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctaaatcaatgaggattctcaattgctctcccaagaatgatcaatgagtcta 263
Query: 64 tatatttggggtctgcttataaaccatggaagatcattgtaccctacatggtgattcagg 123
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 264 tatattaggggtctgcttataaaccatggaagatcatagtaccctacatggtgattcagg 323
Query: 124 actgaaggcacaaaatgtggagaagggttaggtatgtgacttgtggataaatcaccaata 183
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 324 actgaaggcacaaaatgtggagaaggtttaggtatgtgacttgtggataaatcaccaata 383
Query: 184 atatttgaaatagttttctttgacccataatccagttgttagtagtgaaactgtacagca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atatttgaaatagttttctttgacccataatccagttgttagtagtgaaactgtacagca 443
Query: 244 actatggctctccatttaattggctatcttcttttaccctacccattccactccttagac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 actatggctctccatttaattggctatcttcttttaccctacccattccactccttagac 503
Query: 304 ataagggaagttaggcaggggagacagttgttattggccagaagagctccacagctagat 363
|| || || |||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 504 atgagagaggttaggcaggggagacagttgttattggtcagaattgctccacagctagat 563
Query: 364 agcagctcagaaaattctggattcaaataagttaacaaatagcagaataaaccctgtgat 423
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agcagttcggaaaattctggattcaaataagttaacaaatagcagaataaaccctgtgat 623
Query: 424 tgtattcattcaataaatcaatctgtagttacacagacatacattattgtagatgataga 483
|||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 624 tgtattcattcaatgaatcaatcagtagttacacagacatacattattctagatgataga 683
Query: 484 gaaaaactcagtggaagaaggccttgatctaacagattttatatgagtatgtatgatgac 543
|||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 684 gaaaaattcagtggaagaaggccatgatctaacagattttatatgagtatgtatgatgac 743
Query: 544 tgtgtgtaaaatgctggtggtggaacttagttgagaatccttgcctagcatgtatgaaag 603
||||| ||||| || || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tgtgtataaaaggccggaggtggaacttagttgagaatccttgcctagcatgtatgaaag 803
Query: 604 cctggg 609
||||||
Sbjct: 804 cctggg 809
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1012
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1002
Effective search space: 603204
Effective search space used: 603204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_c08.g1 MSMg01no148_c08.g1 CHROMAT_FILE:
MSMg01no148_c08.g1 PHD_FILE: MSMg01no148_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:57 2005
(598 letters)
>mm_chr13_26110145_26111142
Length = 998
Score = 864 bits (447), Expect = 0.0
Identities = 480/491 (97%), Gaps = 1/491 (0%)
Strand = Plus / Minus
Query: 1 ttgacatccacagaagtaaggctctccctatgagtttggtgagagctggaaataaaaagt 60
||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 491 ttgacatccacagaagtaaggctctccctgtgagtttggtgagagctgaaaataaaaagt 432
Query: 61 ggtcatgtaggggagtaatcccaaagcacaagatcttagaatgttcctactgaaagccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ggtcatgtaggggagtaatcccaaagcacaagatcttagaatgttcctactgaaagccag 372
Query: 121 atatactaaagggaaaatatggttcctatctctgaatatatctctcccttgctgggagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 atatactaaagggaaaatatggttcctatctctgaatatatctctcccttgctgggagtt 312
Query: 181 cttcatgaggacaggaatagaacagataagaggcacctggataccttgggcttagaccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 311 cttcatgaggacaggaatagaacagataagaggcacctggataccttgggcttggaccaa 252
Query: 241 cttggatgacctggtctcttgtggtgcatctcagtttctgccttaagtcc-tttttttta 299
|||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 251 cttggatgacgtggtctcttgtggtgcatctcagtttctgccttaagtcctttttttttt 192
Query: 300 aactaggtatttagctcatttacatttccaatgccataccaaaagtccccataccccccc 359
|| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 191 aattaggtatttagctcatttacatttccaatgctataccaaaagtccccataccccccc 132
Query: 360 ccactcccctacctacccactccccctttttggccctggcgttcccctgtactggggcat 419
||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 131 ccactcccctacccacccactccccctttttggccctggcattcccctgtactggggcat 72
Query: 420 ataaagtttgcaagtccaatgggcctatctttgcagtgatggccgactaggccatccttt 479
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 71 ataaagtttgcaagtccaatgggcctctctttgcagtgatggccgactaggccatccttt 12
Query: 480 gatacatatgc 490
|||||||||||
Sbjct: 11 gatacatatgc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space: 580944
Effective search space used: 580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
