CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCCTCTCTTCAGTTATTTCTAGCTCCATGTTTGTGTTTTTAGAGGT
CTGAATTGTTCACAAGCCCCTCCTAAAAGACAAATAAGCCTGATTCCTTT
AAAAAAAAAAGCCCTAAGAGGTTATTTATTTATTTATTTATTTATTTATT
TATTTATTTATTTATTCAAGACAGGGTTTCTTTGTATAGCTCTGGCTGTC
CTGGAACTCACTCTCTAGACGAGGCTGGTCTTGAACTCAGAAAAATCTGC
CTGCCTCGGCCTCCACAAGTGTGGGAATTAAAGGTGTGCGCCACCACTGC
CCAGCAAGGTTGTACTTTCTAATAGTAGCATTTTCCAAGCGCTGTAAGAA
GCTAACAGAATTGTGTTCAAAAATCAAACAGTTTCTAAGGCCGATGCAGC
AAGGAATTTTGCTAAAAATAAAAAGTTCTAATCCTACTGTTTATTCAGGT
TATTACCTTGGTGGGCGGGTTGGGCATATCCCCTTCGTCTCTGCTCCTCT
CCATCACTTTTTTTTCCCACTCTTTGTTTCCCATCTATACATTTTGCCAG
CATTTCCCGTTACGGTGCGTAAACACCTCCCACCTTCTCTCCCCCGATTT
CCCCCATTCCTTTAATATTTTTTCCCTTTCTATCTTTACCTCTCCCTCCT
TTTCTTCACCTCTTCGCTCCGTATCCTTTCTTTACCCCTCTCTCCCT

TCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCCTTTATACAGATGTCTTGCTACATCT
TCACACGGAGGTAACTATATTCCATGACCTCTGTTTCTAGTGATTACAGA
TGCCTTGGGCTTTTCTCAGCAGATACACTTACTCAATTCCAGAGGCTTCT
TAGAAACTCCCTAACATAAACCCATGCTGGATTTTGGTGAGTAACCAACA
TTGATCCATGGGTAACACACACATTCTCCACGCTAACAAATTCACAGAAG
AAAGGCAGATCCCAGGCAGACACCTCTGCTTTGACTTGACTGGCAGTAGA
GCAAACACAACTATTGTCTCTGTAGATACTTTAGGGATTAATTCATTATG
TGTTCCAATTCTATAAAGACATCAAAATCACCATAGGACTTTGTGGAACA
TGTGTTAAGATCACTGTAGGGCTTAGGTTAATCTGTACAGAGAAATCTTC
ACAGATTCCATAAACTCCATTCTTTCCATATTATTTTATTTTATGTATGT
GCATTGCATGTGGCTTATGTACATATTTGTGCAGTTGTGTGCACAGGAGA
TGGAGGGTGCCCCACACACATATGGAGGATAGTTACTGACACTCAAATGC
CTTCCTAGATTGCTCTCCATCTTGTCTTTTGAGACAGGCTCTCTCATTCA
ATATAAAACATATCAN

Query= MSMg01no149_f12.g1 MSMg01no149_f12.g1 CHROMAT_FILE:
MSMg01no149_f12.g1 PHD_FILE: MSMg01no149_f12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:35 2005
         (612 letters)



>mm_chr13_115816691_115817702
          Length = 1012

 Score = 1129 bits (584), Expect = 0.0
 Identities = 605/612 (98%), Gaps = 1/612 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cctttatacagatgtcttgctacatcttcacacggaggtaactatattccatgacctctg 60
           ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 201 cctttatacagatgtctcgctacatcttcacacggaggtaactgtattccatgacctccg 260

                                                                       
Query: 61  tttctagtgattacagatgccttgggcttttctcagcagatacacttactcaattccaga 120
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttctagtgattatagatgccttgggcttttctcagcagatacacttactcaattccaga 320

                                                                       
Query: 121 ggcttcttagaaactccctaacataaacccatgctggattttggtgagtaaccaacattg 180
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 ggcttcttagaaactccctaacataagcccatgctggattttggtgagtaaccaacattg 380

                                                                       
Query: 181 atccatgggtaacacacacattctccacgctaacaaattcacagaagaaaggcagatccc 240
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 atccatgggtaacacacacattctccactctaacaaattcacagaagaaaggcagatccc 440

                                                                       
Query: 241 aggcagacacctctgctttgacttgactggcagtagagcaaacacaactattgtctctgt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggcagacacctctgctttgacttgactggcagtagagcaaacacaactattgtctctgt 500

                                                                       
Query: 301 agatactttagggattaattcattatgtgttccaattctataaagacatcaaaatcacca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agatactttagggattaattcattatgtgttccaattctataaagacatcaaaatcacca 560

                                                                       
Query: 361 taggactttgtggaacatgtgttaagatcactgtagggcttaggttaatctgtacagaga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taggactttgtggaacatgtgttaagatcactgtagggcttaggttaatctgtacagaga 620

                                                                       
Query: 421 aatcttcacagattccataaactccattctttccatattattttattttatgtatgtgca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatcttcacagattccataaactccattctttccatattattttattttatgtatgtgca 680

                                                                       
Query: 481 ttgcatgtggcttatgtacatatttgtgcagttgtgtgcacaggagatggagggtgcccc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttgcatgtggcttatgtacatatttgtgcagttgtgtgcacaggagatggagggtgcccc 740

                                                                       
Query: 541 acacacatatggaggatagttactgacactcaaatgccttcctagattgctctccatctt 600
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 741 acacacatatggaggatagttactgaca-tcaaatgccttcctagattgctctccatctt 799

                       
Query: 601 gtcttttgagac 612
           ||||||||||||
Sbjct: 800 gtcttttgagac 811


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1012
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1002
Effective search space:   603204
Effective search space used:   603204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)