Query= MSMg01no150_b24.b1 MSMg01no150_b24.b1 CHROMAT_FILE:
MSMg01no150_b24.b1 PHD_FILE: MSMg01no150_b24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:36 2005
(337 letters)
>mm_chr13_110775441_110776177
Length = 737
Score = 582 bits (301), Expect = e-170
Identities = 328/341 (96%), Gaps = 8/341 (2%)
Strand = Plus / Minus
Query: 1 gtaaaactgtttctggcttaacagaagaaacactcggatctgcatgtcattcatgcctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 gtaaaactgtttctggcttaacagaagaaacactcggatctgcatgtcattcatgcctct 478
Query: 61 agcaggttttcaagtatttttataatacacatgtagctctggctgctcaccctaccaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 agcaggttttcaagtatttttataatacacatgtagctctggctgctcaccctaccaggg 418
Query: 121 cagacagaacctttgccaggacactgcttggagtgtgtgccacttggctgacaaacatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 cagacagaacctttgccaggacactgcttggagtgtgtgccacttggctgacaaacatgg 358
Query: 181 cagactctgacagaaagcaaaaggtgatggagacatgtgttccttgcagccattacaaaa 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 357 cagactctgacagaaagcaaaaggtgatggggacatgtgttccttgcagccattacaaaa 298
Query: 241 ccacccc----ttttatataaccagtgactctgtccctgccctttcaagatgagatgctt 296
||||||| ||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 297 ccaccccagcg----atataacgagtgactctgtccctgccctttcaggatgagatgctt 242
Query: 297 ttccctcataatatggaaacattaagctaaattgacctcaa 337
||||||| || ||||||||||||||||||||||||||||||
Sbjct: 241 ttccctcgtagtatggaaacattaagctaaattgacctcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space: 238784
Effective search space used: 238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no150_b24.g1 MSMg01no150_b24.g1 CHROMAT_FILE:
MSMg01no150_b24.g1 PHD_FILE: MSMg01no150_b24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:36 2005
(343 letters)
>mm_chr13_110628278_110629020
Length = 743
Score = 640 bits (331), Expect = 0.0
Identities = 340/343 (99%)
Strand = Plus / Plus
Query: 1 ctgagctctgattttcagtttataaaaggggggaggactgcctaatggtcttgctgcgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgagctctgattttcagtttataaaaggggggaggactgcctaatggtcttgctgcgag 260
Query: 61 ggcttcatgaaacagcatacgttcagcatccaacaaatgtcagtttccttacctcatcgc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 ggcttcatgaaacagcatacgttcagcatccaacaaatgtcagtttccttacctcatcac 320
Query: 121 agtgcataactatggaagagtcaatttggaataattccaaagtaaaataaaagtaacgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtgcataactatggaagagtcaatttggaataattccaaagtaaaataaaagtaacgaa 380
Query: 181 attggcaaaacttaattcggtagacatttttgaagttctataaagttaagaactccatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attggcaaaacttaattcggtagacatttttgaagttctataaagttaagaactccatgc 440
Query: 241 tatatgattcaattatatacgtctgtgtacatatgatgaacattactattcccgtgtaac 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacatgattcaattatatacgtctgtgtacatatgatgaacattactattcccgtgtaac 500
Query: 301 agatgcggggattaaatatttactgtggcaggtccagctactc 343
|||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agattcggggattaaatatttactgtggcaggtccagctactc 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
