Query= MSMg01no151_b18.b1 MSMg01no151_b18.b1 CHROMAT_FILE:
MSMg01no151_b18.b1 PHD_FILE: MSMg01no151_b18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:50 2005
(655 letters)
>mm_chr13_68856232_68857286
Length = 1055
Score = 1245 bits (644), Expect = 0.0
Identities = 653/656 (99%), Gaps = 2/656 (0%)
Strand = Plus / Minus
Query: 1 acacagagaaaccctgtctcaaaaacaaaacaaaaacaaaaaaaaggcaagatcccatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 acacagagaaaccctgtctcaaaaacaaaacaaaaacaaaaaaaaggcaagatcccatac 621
Query: 61 agcttccagatagatgcttcgggcggatgccttgagtgcttctgtcataagtttcccaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agcttccagatagatgcttcgggcggatgccttgagtgcttctgtcataagtttcccaac 561
Query: 121 attttccaaatgaagtagaaaagagtcgaatgctgttcttgaaacaagacagggagcggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 attttccaaatgaagtagaaaagagtcgaatgctgttcttgaaacaagacagggagcggc 501
Query: 181 tcacagggaagcccttcagcctctgggtttggttggcattggttatgttttgttgttccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tcacagggaagcccttcagcctctgggtttggttggcattggttatgttttgttgttccc 441
Query: 241 taaccattaaatcttgttgggtttggtaggatcctctgttcttctggtttccacctactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taaccattaaatcttgttgggtttggtaggatcctctgttcttctggtttccacctactg 381
Query: 301 attccattggaactggattaccaattagtgtttctctctatttatacaacgcagtgattt 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 380 attccattggaactggattaccaattagtgtttctctctatttatacaaagcagtgattt 321
Query: 361 ctctgcagattgccatgtgttgagttcagcatcagaccaacagacacagcaaactccctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctctgcagattgccatgtgttgagttcagcatcagaccaacagacacagcaaactccctt 261
Query: 421 ttccaagtacatgcatgaagtgcaagaccaacacactcacttctgtctgatctgagtcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttccaagtacatgcatgaagtgcaagaccaacacactcacttctgtctgatctgagtcca 201
Query: 481 gctccactcccaagatctgattaatctctgcagtacccaaggggccatacatcctaacac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gctccactcccaagatctgattaatctctgcagtacccaaggggccatacatcctaacac 141
Query: 541 agccatgttagaggccagggcttcaacatatgacattgaggaagacacaaacatttaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 agccatgttagaggccagggcttcaacatatgacattgaggaagacacaaacatttaaaa 81
Query: 601 cattttaatcc-aaatagaatggctgagtctctccctccacggcttctgtcatttc 655
|| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 ca-tttaatccaaaatagaatggctgagtctctccctccacggcttctgtcatttc 26
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_b18.g1 MSMg01no151_b18.g1 CHROMAT_FILE:
MSMg01no151_b18.g1 PHD_FILE: MSMg01no151_b18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:50 2005
(644 letters)
>mm_chr13_68763692_68764735
Length = 1044
Score = 1232 bits (637), Expect = 0.0
Identities = 640/641 (99%)
Strand = Plus / Plus
Query: 1 aattccatcacacttcctataacagatttttttctcattatctttagagcaatctctact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattccatcacacttcctataacagatttttttctcattatctttagagcaatctctact 260
Query: 61 cttttccccaaccccagaatgtgattagtgcgtttttaattagagttactgtagccatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttttccccaaccccagaatgtgattagtgcgtttttaattagagttactgtagccatgg 320
Query: 121 ctgaaattgattaaatgagcagtgggaacactaacatgaattgattttatttttttagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgaaattgattaaatgagcagtgggaacactaacatgaattgattttatttttttagtt 380
Query: 181 gttgctttaatttgtcagatattgtctttctttcccttgggtggattgtagagatttggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttgctttaatttgtcagatattgtctttctttcccttgggtggattgtagagatttggg 440
Query: 241 gtcatttatagcttgtaagatatcttgctatgatgattttattctgctctttctgtcagt 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtcatttagagcttgtaagatatcttgctatgatgattttattctgctctttctgtcagt 500
Query: 301 cttactttcatttctcccacttcccagtcttcatctttcctacactttcctttccaggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttactttcatttctcccacttcccagtcttcatctttcctacactttcctttccaggaa 560
Query: 361 ggcagggctacctgagctttgagctgcagacctcccctgcaaagtctttatatatgtgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggcagggctacctgagctttgagctgcagacctcccctgcaaagtctttatatatgtgat 620
Query: 421 ggggtcagcaaagggaatagttcataagacgtctcctgggctctcagtacaggtgggtac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggggtcagcaaagggaatagttcataagacgtctcctgggctctcagtacaggtgggtac 680
Query: 481 cttccctctggggcattcacggctatgggtcaccaccctgccttgcaggtcacctctggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttccctctggggcattcacggctatgggtcaccaccctgccttgcaggtcacctctggt 740
Query: 541 cagaggatttatattttgaaggcccataccttcttatcattagagtctggttggtgtcat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cagaggatttatattttgaaggcccataccttcttatcattagagtctggttggtgtcat 800
Query: 601 tcctaacagttaatgaaaaaactatgatttttctctataga 641
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tcctaacagttaatgaaaaaactatgatttttctctataga 841
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
