Query= MSMg01no151_f10.b1 MSMg01no151_f10.b1 CHROMAT_FILE:
MSMg01no151_f10.b1 PHD_FILE: MSMg01no151_f10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:07 2005
(370 letters)
>mm_chr13_86533484_86534253
Length = 770
Score = 669 bits (346), Expect = 0.0
Identities = 361/366 (98%)
Strand = Plus / Plus
Query: 5 gaattcaatttcttcgtgttacaaaccaacttggaaataacatttcagctgcaggctaca 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatttctttgtgttacaaaccaacttggaaataacatttcagctgcaggctaca 264
Query: 65 gttttctatatatgttcattggtcaatagttttattgtgcttctttgtcagtatattatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gttttctatatatgttcattggtcaatagttttattgtgcttctttgtcagtatattatt 324
Query: 125 tatattcagttgattttcaatttgttgatttaagaagtatttccgtgcacagctccccta 184
| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttatccagttgattttcaatttgttgatttaagaagtatttccgtgcacagctccccta 384
Query: 185 gccagttcctagatgctcatattagtagctttgctcagaggaaaaccctttaacagttga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gccagttcctagatgctcatattagtagctttgctcagaggaaaaccctttaacagttga 444
Query: 245 gatattttacctagacagagtcagaattcattgtaatttaactctcttgagtgccatgta 304
|||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 445 gatattttacgtagacagagtcagaattcattgtaatttagctctcttgagtgccatgta 504
Query: 305 tctaaaaactaactgtaacagaagaatgacagtctaccttccttaccaataggcatacta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tctaaaaactaactgtaacagaagaatgacagtctaccttccttaccaataggcatacta 564
Query: 365 actttt 370
||||||
Sbjct: 565 actttt 570
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_f10.g1 MSMg01no151_f10.g1 CHROMAT_FILE:
MSMg01no151_f10.g1 PHD_FILE: MSMg01no151_f10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:07 2005
(569 letters)
>mm_chr13_86693548_86694516
Length = 969
Score = 938 bits (485), Expect = 0.0
Identities = 500/505 (99%), Gaps = 2/505 (0%)
Strand = Plus / Minus
Query: 66 cagagacagagagacacagagtgagattggtccccacttgagcttttaaaatgctaacac 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 cagagacagagagacacagagtgagattggtccccacttgagcttttaaaatgctaacac 910
Query: 126 caaaccccaaagtgacatattttcaataacaatgccagtaaggctgtaattcctaatcct 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 caaaccccaaagtgacatattttcaataacaatgccagtaaggctgtaattcctaatcct 850
Query: 186 tctcaagtagtcctaatccctaataaccaggaattcaattatatgagccttagggggcca 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 tctcaagtagtcctaatccctaataaccaggaattcaattatatgagccttagggggcca 790
Query: 246 tgctttttcaaaccaccacattctacattattcattatctcctctctctttccaattaat 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 tgctttttcaaaccaccacattctacattattcattatctcctctctctttccaattaat 730
Query: 306 taaacctttattcttgctgtgtaaaaatggttcaggc-tcaccttatgttggaaaatttc 364
|||||||||||||||||||||||||||||||||| || | || |||||||||||||||||
Sbjct: 729 taaacctttattcttgctgtgtaaaaatggttca-gctttactttatgttggaaaatttc 671
Query: 365 aatttctttgaagtttcttttacataaagcatcatttcatttctatatcttgtcagaatc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 aatttctttgaagtttcttttacataaagcatcatttcatttctatatcttgtcagaatc 611
Query: 425 tttctcttccagcctggcttccttgatcttgatctttgtcagtgttaaatttctgcttac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tttctcttccagcctggcttccttgatcttgatctttgtcagtgttaaatttctgcttac 551
Query: 485 agtgtttggcaacattgttgttgtggccttcaatactttattaggtgtggaattttctac 544
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 agtgtttgtcaacattgttgttgtggccttcaatactttattaggtgtggaattttctac 491
Query: 545 ttacttgaaattttatgcagatgtt 569
|||||||||||||||||||||||||
Sbjct: 490 ttacttgaaattttatgcagatgtt 466
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space: 536081
Effective search space used: 536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
