Query= MSMg01no153_m21.b1 MSMg01no153_m21.b1 CHROMAT_FILE:
MSMg01no153_m21.b1 PHD_FILE: MSMg01no153_m21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:16 2005
(389 letters)
>mm_chr13_44441449_44442237
Length = 789
Score = 688 bits (356), Expect = 0.0
Identities = 380/388 (97%), Gaps = 2/388 (0%)
Strand = Plus / Plus
Query: 4 ggaattctgcaa-catactgaccatctcttatgtaccaaccactgagctaggttttggac 62
|||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 202 ggaattctgcaaacatactgaccatctcttatgtaccaaccactgagttaggttttggac 261
Query: 63 ac-caccgctcctgccctcttggagctcacattaggctagtgggcaaatccctgtgaggt 121
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 acacaccgctcctgccctcttggagctcacattaggctagtgggcaaatccctgtgaggt 321
Query: 122 ggccctaagagagtgtcagagaccagaaggttgggttgacacaatccagaatctaggaag 181
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 322 ggccctaagagagtgtcagagaccagaaggttgggttgacacaatcctgaagctaggaag 381
Query: 182 gctgactctgaggaaaggacgcatgccaggactccataggtactgaattttcttatacgt 241
||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 382 gctgactctgaggaaagaacgcatgccaggcctccataggtactgaattttcttatacgt 441
Query: 242 gatacatttttaaaatgtgtatctttagccttgtggtggtggtgcacacctttaatccca 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gatacatttttaaaatgtgtatctttagccttgtggtggtggtgcacacctttaatccca 501
Query: 302 gcactcaggagacagaggcaggcagatctctaaaagttcaaagccaggctggtctataga 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gcactcaggagacagaggcaggcagatctctaaaagttcaaagccaggctggtctataga 561
Query: 362 gtgagtttcaggacagcaaaggatacac 389
|| |||||||||||||||||||||||||
Sbjct: 562 gtaagtttcaggacagcaaaggatacac 589
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 789
Length adjustment: 9
Effective length of query: 380
Effective length of database: 780
Effective search space: 296400
Effective search space used: 296400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_m21.g1 MSMg01no153_m21.g1 CHROMAT_FILE:
MSMg01no153_m21.g1 PHD_FILE: MSMg01no153_m21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:16 2005
(488 letters)
>mm_chr13_44618093_44618980
Length = 888
Score = 895 bits (463), Expect = 0.0
Identities = 484/495 (97%), Gaps = 7/495 (1%)
Strand = Plus / Minus
Query: 1 tttcaggagactattaggtagataagaaagacgcattagccaggtgagaagaccccagaa 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 820 tttcaggagactattaggtagataagaaaaacgcattagccaggtgagaagaccccagaa 761
Query: 61 gacatcttctgtggatgctgagtctttaaatgtcaccagactaacccatattgactgtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 gacatcttctgtggatgctgagtctttaaatgtcaccagactaacccatattgactgtga 701
Query: 121 tcag-------gaaaaaaaaaaaaacctcacttagatagggttccagaaggcacaatcag 173
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 tcagaaaaaaaaaaaaaaaaaaaaacctcacttagatagggttccagaaggcacaatcag 641
Query: 174 gtagaaactgaccaggacctgaacatctaagacatcactgtgatggtttgagtagcatca 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 gtagaaactgaccaggacctgaacatctaagacatcactgtgatggtttgagtagcatca 581
Query: 234 gggtaggctcacgtcacaatggaccaggaccagtggaaatagtgtggtggggatttagag 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 580 gggtaggctcacgtcacaatggaccaggaccagtggaaatagtgtggtggggatttggag 521
Query: 294 ttcaaatcttaagactcaccgagtcagcatgtctttttggaggccttgtaattaacgcag 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 520 ttcaaatcttaagactcaccgagtcagcatgtctttttggaggccttgtaattaaggcag 461
Query: 354 cttctgctagcatccacgggaatagtaaagccatggaatggaaagaaatactgtggcata 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 cttctgctagcatccacgggaatagtaaagccatggaatggaaagaaatactgtggcata 401
Query: 414 gcacagccaccgtgatgttgaatatcaggtgggagctccagggggctgttttgatgctta 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gcacagccaccgtgatgttgaatatcaggtgggagctccagggggctgttttgatgctta 341
Query: 474 gcattcaaagctgtg 488
|||||||||||||||
Sbjct: 340 gcattcaaagctgtg 326
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 888
Length adjustment: 10
Effective length of query: 478
Effective length of database: 878
Effective search space: 419684
Effective search space used: 419684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
