TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCAAATTGACTGGACTAGAAAAGAAATTCCTCCTGTGCCATCATAG
TCAAAAACACCAAATGTACAAAACAAACAAAGAATATTAAAAACAGTAAA
GGAAAAAAGCCAAGCACCATATAAAGTCAGCCCTATCAGAATTACACCAG
ATTTCTCACCAGAGATTATGAAAGTGAGAAGATCCTGGGCAGATGTCATA
CAGACCCTAAGAGAACACACATGCCAGCCCAGCCTATAATACCCAGCAAA
ACTCTCAATTACTAGATGGAGAGACTAATATATTCTATGAAAAAACCAAA
TATGCACAATATCCTTCCACAAATCCAGCCCTACAAATGATAATAAATGG
AAAACTCCCACACAAGGAGGGGTACTATACCCTAGAAAAAGCAAGAAAGT
AAACTTGTTTTAACAAACACATAAAAGGACACCAAAACATAATTCCACCT
CTAACAACAAAAACAACAGGAAGCAAAAATCACTTTTTCTTAATATCTCT
TAATATCAATGAATTCAATTCACCAGTAAAAAGGCATAGACTAGCCTTTT
CCTAGGTCAGATATGTAAGCAGGACCCAGCATTTTGCATCTTTCAGGAAA
TATATCTCAATGACAAGGACAGAAACTACCTGCAATAAAAGGCTGGGAAA
TTTTTTTCCAAGCAAATAGTCCCAAGAAACAAGATAGAG

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAGCTAGATATATAGAAACCCCAGAAGG
TATATTGCTATATCAATATTAATATAAATACAAATCTCTCAAGTAATATT
AGGAAGTAAGATCAATAACATAAAGATTATTTTCCAATTTCCAAAAGAAA
TGTATTTGTTGGTTGTTTTTAATAGAGAAATTGGACATGTAATGTTTACT
ACTAATAGAAAAAGGAAAAAATATTTTTATTTTAATAGAAAAAATATCTA
TTTGACACAATACCAAATCAGTTATGATAAAAGAAAAAATTCTTAAGACA
CACACATTGACATGAGTCATGCTTAATTTGATAGAAGACATCTATGAGAA
TACCATTGTAAACAATCCTTAGTGTAGACAGGTATAAGCAGTAATTTCTC
AGCTCTAACACCTGAAATTGTGTCCATAAAGTACAAAGTAACAAAGAGAA
CAGCATATTTTAAAATTGTTGATTTTAAATAACACAATTATTTGAGCCAA
ATCCAGTAAGAACATTTGCAAAATAAATACTAACATTTTATTTTGGAAAT
CTTAAAAAATAGCACATATGAATATAACTCACAAATATGAACTTTGATAT
GTAATTTACTGACATAATATATTTACAATTGAAGGAAATGGAAAAAGTAT
TTTATTCGTGTTTGCAATGATAACACAACTATCATGTC

Query= MSMg01no155_a01.g1 MSMg01no155_a01.g1 CHROMAT_FILE:
MSMg01no155_a01.g1 PHD_FILE: MSMg01no155_a01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:48 2005
         (665 letters)



>mm_chr13_87703612_87704678
          Length = 1067

 Score = 1127 bits (583), Expect = 0.0
 Identities = 625/639 (97%), Gaps = 3/639 (0%)
 Strand = Plus / Minus

                                                                        
Query: 28   tatattgctatatcaatattaatataaatacaaatctctcaagtaatattaggaagtaag 87
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1063 tatattgctatatcaatattaatataaatacaaatctctcaagtaatattaggaagtaag 1004

                                                                        
Query: 88   atcaataacataaagattattttccaatttccaaaagaaatgtatttgttggttgttttt 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 atcaataacataaagattattttccaatttccaaaagaaatgtatttgttggttgttttt 944

                                                                        
Query: 148  aatagagaaattggacatgtaatgtttactactaatagaaaaaggaaaaaatatttttat 207
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943  aatagagaaattggaaatgtaatgtttactactaatagaaaaaggaaaaaatatttttat 884

                                                                        
Query: 208  tttaatag-aaaaaatatctatttgacacaataccaaatcagttatgataaaag-aaaaa 265
            |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 883  tttaatagaaaaaaatatctatttgacacaataccaaatcagttatgataaaagaaaaaa 824

                                                                        
Query: 266  attcttaagacacacacattgacatgagtcatgcttaatttgatagaagacatctatgag 325
            || ||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||| 
Sbjct: 823  atacttaagacacatacattgacatgagtcatgctttatttgatagaagacatttatgaa 764

                                                                        
Query: 326  aataccattgtaaacaatccttagtgtagacaggtataagcagtaatttctcagctctaa 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763  aataccattgtaaacaatccttagtgtagacaggtataagcagtaatttctcagctctaa 704

                                                                        
Query: 386  cacctgaaattgtgtccataaagtacaaagtaacaaagagaacagcatattttaaaattg 445
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703  cacctgaaatcgtgtccataaagtacaaagtaacaaagagaacagcatattttaaaattg 644

                                                                        
Query: 446  ttgattttaaataacacaattatttgagccaaatccagtaagaacatttgcaaaataaat 505
            |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 643  ttgattttaaataacacaattaattgcgccaaatccagtaagaacatttgcaaaataaat 584

                                                                        
Query: 506  actaacattttattttggaaatctt-aaaaaatagcacatatgaatataactcacaaata 564
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 583  actaacattttattttggaaatcttaaaaaaatagcacatatgaatataactcacaaata 524

                                                                        
Query: 565  tgaactttgatatgtaatttactgacataatatatttacaattgaaggaaatggaaaaag 624
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 523  tgaactttgatatgtaatttactgacataatatatttacaattgaaggaaatagaaaaag 464

                                                   
Query: 625  tattttattcgtgtttgcaatgataacacaactatcatg 663
            ||||||||| |||||||||||||||||||||||||||||
Sbjct: 463  tattttatttgtgtttgcaatgataacacaactatcatg 425


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1067
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1057
Effective search space:   692335
Effective search space used:   692335
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)