Query= MSMg01no155_j22.b1 MSMg01no155_j22.b1 CHROMAT_FILE:
MSMg01no155_j22.b1 PHD_FILE: MSMg01no155_j22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:33 2005
(619 letters)
>mm_chr13_89710263_89711280
Length = 1018
Score = 617 bits (319), Expect = 0.0
Identities = 343/351 (97%), Gaps = 2/351 (0%)
Strand = Plus / Minus
Query: 5 gaattctcaaaggaacaaaaaaaatggttaagcaacatcttaaaaactgttcttccctaa 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gaattctcaaaggaagaaaaaaaatggttaagcaacatcttaaaaactgttcttccctaa 291
Query: 65 caattggtaaagcatgaatcaaaaaaaaaaattgagattttatcaatttcaaacatttca 124
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 290 caattggtaaagcatgaatc-aaaaaaaaaattgagattttatcaatttcaaacatttca 232
Query: 125 acatttccttaatttcaacaattttgtgatcaccaaaacagccatcaacaaattcctaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 acatttccttaatttcaacaattttgtgatcaccaaaacagccatcaacaaattcctaag 172
Query: 185 tgggtgtgggaaaaagaaaaccctaattcaatgttggtgctactgcaaactggttcaaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 171 tgggtgtgggaaaaagaaaaccctaattcaatgttggtgctactgcaaactggttcagca 112
Query: 245 acacaaaaaacagtgtagagaatcctaaaaaa-ctaaatataaatctaccatatgcttca 303
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 111 acacagaaaacagtgtagagaatcctaaaaaaactaaatataaatctaccatatgcttca 52
Query: 304 ggtatccctaaatgtcctttaaccaaaaaatggataataaaaatgtggtac 354
||||| |||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 51 ggtattcctaaatgtcctttaatcaaaaaatggataatgaaaatgtggtac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1018
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1008
Effective search space: 613872
Effective search space used: 613872
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_j22.g1 MSMg01no155_j22.g1 CHROMAT_FILE:
MSMg01no155_j22.g1 PHD_FILE: MSMg01no155_j22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:33 2005
(378 letters)
>mm_chr13_89618907_89619681
Length = 775
Score = 708 bits (366), Expect = 0.0
Identities = 374/378 (98%), Gaps = 3/378 (0%)
Strand = Plus / Plus
Query: 1 cctacatgagttgatctcatatactgtcagtttctgacatatctgccaacagtccccctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctacatgagttgatctcatatactgtcagtttctgacatatctgccaacagtccccctt 260
Query: 61 ttttgtcactcatctcctagtctaccaagagcaacttatctgcccctgtgggttgacctc 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 t---gtcactcatctcctagtctaccaagagcaacttatctgcccctgtgggttgacctc 317
Query: 121 cctagagtcctttaccacctagtacttctctgctaaaactgaaggaagtgtgacatgggg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 318 cctagagtcctttaccacctagtacttctctgctaaaactgaaggaagtgtgacatggag 377
Query: 181 aaaacaacccgtttgcctcgagctttaaaataattcagtggaagagagagtatttcaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aaaacaacccgtttgcctcgagctttaaaataattcagtggaagagagagtatttcaaga 437
Query: 241 gtcacctactaccagcctttctcctgagtccttgagtggttttgacagaatgtcacttgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gtcacctactaccagcctttctcctgagtccttgagtggttttgacagaatgtcacttgg 497
Query: 301 cccaaagcctaacttcttttaagtattccttccgaagtctttgtaagtaaataattggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 cccaaagcctaacttcttttaagtattccttccgaagtctttgtaagtaaataattggag 557
Query: 361 gagaatgtagatgacaaa 378
||||||||||||||||||
Sbjct: 558 gagaatgtagatgacaaa 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 775
Length adjustment: 9
Effective length of query: 369
Effective length of database: 766
Effective search space: 282654
Effective search space used: 282654
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
