Query= MSMg01no155_l21.b1 MSMg01no155_l21.b1 CHROMAT_FILE:
MSMg01no155_l21.b1 PHD_FILE: MSMg01no155_l21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:42 2005
(281 letters)
>mm_chr13_35155705_35156385
Length = 681
Score = 458 bits (237), Expect = e-133
Identities = 279/313 (89%), Gaps = 32/313 (10%)
Strand = Plus / Minus
Query: 1 aagcagaaagaacaaagaaaacatgttaatatctgataaggactgcaggcaaataaacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aagcagaaagaacaaagaaaacatgttaatatctgataaggactgcaggcaaataaacta 328
Query: 61 aatggattcatagcttcagtgaaatttgccaaactggaaatataaagtaagtaaaatgta 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 327 aatggattcatagcttcagtgaaatttgcaaaactggaaatataaagtaagtaaaatgta 268
Query: 121 gtccgtgtcaagatgtacgcttattgtagctagcaatatggcaactac---ta------- 170
|||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 267 gtccgtgtcaagatgtacgcttattgtagctagcaatatggcaactacaaatatatatat 208
Query: 171 ----------------------atatatatatatatatagtttgtgacaactggcaaaga 208
||||||||||||||||||||||||||||||||||||||
Sbjct: 207 atatatatatatatatatatatatatatatatatatatagtttgtgacaactggcaaaga 148
Query: 209 tgctttgtttgatcaaacttccacaggtttctgaatcttgtaatctacttgtgcatttcc 268
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 147 tgctttgtttgatcaaacttccacaggtttctgaatcttgtgatctacttgtgcatttcc 88
Query: 269 ttgtaaaatctag 281
|||||||||||||
Sbjct: 87 ttgtaaaatctag 75
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no155_l21.g1 MSMg01no155_l21.g1 CHROMAT_FILE:
MSMg01no155_l21.g1 PHD_FILE: MSMg01no155_l21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:43 2005
(418 letters)
>mm_chr13_34987020_34987837
Length = 818
Score = 781 bits (404), Expect = 0.0
Identities = 413/416 (99%)
Strand = Plus / Plus
Query: 1 tgaaaaaacttaatgatgctgatcctgatgacaagttccattgcctgcgcctcttcagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaaaaaacttaatgatgctgatcctgatgacaagttccattgcctgcgcctcttcagac 260
Query: 61 acttttaccacaaacagcacctctgtctcgtctttgaacctctcaggtaaggaccagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acttttaccacaaacagcacctctgtctcgtctttgaacctctcaggtaaggaccagaac 320
Query: 121 agtcaattgctcctgtagtttgtctagcaacctcatgctgggtaaatgctctcgaggaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtcaattgctcctgtagtttgtctagcaacctcatgctgggtaaatgctctcgaggaac 380
Query: 181 tgctaattttcctgttggttcttcttattcattgtattatcttgaaaatcatcagcatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgctaattttcctgttggttcttcttattcattgtattatcttgaaaatcatcagcatgt 440
Query: 241 agagcatatagttctgtactgggtggcagacagtaagaaacctcaggtaccctgcaggtc 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agagcatagagttctgtactgggtggcagacagtaagaaacctcaggtaccctgcaggtc 500
Query: 301 agctggagtggtggggacagataccagtttgaccttcagcaatatggcttctgagttgta 360
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agctggagtggtagggacagataccagtttgaccttcagcaatatggcttctgagttgta 560
Query: 361 ttttcaggtgaagactttctcgagtaatatagctcttcctttgtttattttgaaag 416
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 561 ttttcaggtgaagactttctcgagtaatatagttcttcctttgtttattttgaaag 616
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
