Query= MSMg01no156_e06.b1 MSMg01no156_e06.b1 CHROMAT_FILE:
MSMg01no156_e06.b1 PHD_FILE: MSMg01no156_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:21 2005
(321 letters)
>mm_chr13_75285052_75285772
Length = 721
Score = 588 bits (304), Expect = e-172
Identities = 313/316 (99%), Gaps = 1/316 (0%)
Strand = Plus / Plus
Query: 5 gaattctcacaacaatcataaaacaagtatgaaaaaaatagcatcatttctggttcacac 64
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 206 gaattctca-aacaatcataaaacaagtatgaaacaaatagcatcatttctggttcacac 264
Query: 65 attatataattgagttatgaggaggtattctggttggttcaaggtcacacagatgctaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attatataattgagttatgaggaggtattctggttggttcaaggtcacacagatgctaaa 324
Query: 125 ttgggattttaatctggagtagttctaatcccaggatatgcctcacaatagcaagacata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgggattttaatctggagtagttctaatcccaggatatgcctcacaatagcaagacata 384
Query: 185 gggcacgtgtgtattttagaagacatttgtataatgagagtcaagttagaatcagtctat 244
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gggcacatgtgtattttagaagacatttgtataatgagagtcaagttagaatcagtctat 444
Query: 245 agtgaaagctaatttattatgatttcaaatggtagaaaataattaatcgtttaaatcacg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agtgaaagctaatttattatgatttcaaatggtagaaaataattaatcgtttaaatcacg 504
Query: 305 tatatgccatgtttta 320
||||||||||||||||
Sbjct: 505 tatatgccatgtttta 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_e06.g1 MSMg01no156_e06.g1 CHROMAT_FILE:
MSMg01no156_e06.g1 PHD_FILE: MSMg01no156_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:21 2005
(294 letters)
>mm_chr13_75369861_75370554
Length = 694
Score = 553 bits (286), Expect = e-162
Identities = 292/294 (99%)
Strand = Plus / Minus
Query: 1 tgtgtgctcgccagcaccaaaacaggcctgcttctctctgctactgttcaccttctgcgg 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tgtgtgctcaccagcaccaaaacaggcctgcttctctctgctactgttcaccttctgcgg 435
Query: 61 gaagctagttgaatgaaaggtcagtggatcagccatctttttctccccttcccttcacac 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 434 gaagctagttgaatgaaaggtcagtggctcagccatctttttctccccttcccttcacac 375
Query: 121 cctcagtgaggcagcactgactctgcagctgacatcacactttcttatgaatgtggtgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 cctcagtgaggcagcactgactctgcagctgacatcacactttcttatgaatgtggtgag 315
Query: 181 caatgttcccaggtggattgctattgcacataaccttcgataattttgcctggatagttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 caatgttcccaggtggattgctattgcacataaccttcgataattttgcctggatagttc 255
Query: 241 aaggtagtgatttcattggcaacattaaatatttactgaatcttaagttttatc 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 aaggtagtgatttcattggcaacattaaatatttactgaatcttaagttttatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
