Query= MSMg01no158_p17.b1 MSMg01no158_p17.b1 CHROMAT_FILE:
MSMg01no158_p17.b1 PHD_FILE: MSMg01no158_p17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:36 2005
(324 letters)
>mm_chr13_90296275_90297000
Length = 726
Score = 590 bits (305), Expect = e-173
Identities = 315/319 (98%), Gaps = 2/319 (0%)
Strand = Plus / Plus
Query: 5 gaattcctccttattcccattgtaagaattggaatggggaagggctaagacaagaaacat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctccttattcccattgtaagaattggaatggggaagggctaagacaagaaacat 264
Query: 65 ggaacaagttgaggaaatccaccctaaagcttcttttttctcatgtttttcagcaatagc 124
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 265 ggaacaagttgaggaaatccaccctaaagcttctcttttctcatgtttttcagcaatagc 324
Query: 125 caataatctccatcatatttaagtcattttaagtttttt--actatttgtaattaagagc 182
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 325 caataatctccatcatatttaagtcattttaagttttttttactatttgtaattaagagc 384
Query: 183 atctaaaatttttctgaattttcatcacagattttaatgtcatttgtgtgaaagtttgag 242
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atctaaaaattttctgaattttcatcacagattttaatgtcatttgtgtgaaagtttgag 444
Query: 243 tgtcttcgaatccattggaattaacattgagttcctgacctctacatttgttagtaatgt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgtcttcgaatccattggaattaacattgagttcctgacctctacatttgttagtaatgt 504
Query: 303 atttcaaatctatattttg 321
|||||||||||||||||||
Sbjct: 505 atttcaaatctatattttg 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 726
Length adjustment: 9
Effective length of query: 315
Effective length of database: 717
Effective search space: 225855
Effective search space used: 225855
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no158_p17.g1 MSMg01no158_p17.g1 CHROMAT_FILE:
MSMg01no158_p17.g1 PHD_FILE: MSMg01no158_p17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:36 2005
(677 letters)
>mm_chr13_90447060_90448136
Length = 1077
Score = 739 bits (382), Expect = 0.0
Identities = 412/422 (97%)
Strand = Plus / Minus
Query: 256 gaattaatagttccaagatgaatcaatgttgtatctatctgaccccacttttaaagcaac 315
||||||||||||||||||||||||||||||| | ||||||||| | ||||||||||||
Sbjct: 1077 gaattaatagttccaagatgaatcaatgttggaactatctgacaagagttttaaagcaac 1018
Query: 316 caatataaaaatgaatcaataaacacccacaaaaagccaatttgttttgaattacaaaag 375
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1017 caatataaaaatgaatcaataaacagttacaaaaagccaatttgttttgaattacaaaag 958
Query: 376 aatagaaaaatcttagcaaagaaatagtgatttaaaaaagaacctcctagggattatgta 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 aatagaaaaatcttagcaaagaaatagtgatttaaaaaagaacctcctagggattatgta 898
Query: 436 acttaaaagtgtgacaggaaacaagtaataaagtgctgttatgaaatatcagtaattaca 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 acttaaaagtgtgacaggaaacaagtaataaagtgctgttatgaaatatcagtaattaca 838
Query: 496 ttaagtttaaatgatttaaaggaagtaataaatactttgaggatattatgattcagtttt 555
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 ttaggtttaaatgatttaaaggaagtaataaatactttgaggatattatgattcagtttt 778
Query: 556 aaataacttaaatatgagctctgaatatgaagcatattctagacacaaaaacacagaaaa 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 aaataacttaaatatgagctctgaatatgaagcatattctagacacaaaaacacagaaaa 718
Query: 616 gttaaaagtagatggtcatgctaaaaagataagtgacaatgagtccacaacagagagtcc 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 gttaaaagtagatggtcatgctaaaaagataagtgacaatgagtccacaacagagagtcc 658
Query: 676 ac 677
||
Sbjct: 657 ac 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space: 711689
Effective search space used: 711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
