Query= MSMg01no159_a11.b1 MSMg01no159_a11.b1 CHROMAT_FILE:
MSMg01no159_a11.b1 PHD_FILE: MSMg01no159_a11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:40 2005
(317 letters)
>mm_chr13_58154007_58154720
Length = 714
Score = 530 bits (274), Expect = e-155
Identities = 303/314 (96%), Gaps = 5/314 (1%)
Strand = Plus / Plus
Query: 5 gaattcctacctttgtctggattacccacgtgttaatattttattcttagataaaggagt 64
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattgctacctttgtctggattacccacgtgttaatattttattcttagataaaggagt 264
Query: 65 tataaacatcccccccccccataaagcgccatcctggtcagcctgatgatgtgactgtgg 124
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 265 tataaaca---cccccccccataaagcgccatcctggtcagcctgacgatgtgactgtgg 321
Query: 125 tccggatcaccttccctgaatggggcaaaccagcgagccggactcctgactgtcatgaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tccggatcaccttccctgaatggggcaaaccagcgagccggactcctgactgtcatgaag 381
Query: 185 aatgagggtcagcctttctg-actttgcctctctgagcctttggcttttaggtactagga 243
||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||
Sbjct: 382 aatgagggtcagccttt-tggactttgcctctctgagcctttggcttttaggtcctagga 440
Query: 244 gaatcttacaaaccaacacagccagcctctggccttcttatgtctagctttggttggacc 303
||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 gaatcttacaaaccagcacagccagcctctggccttcaaatgtctagctttggttggacc 500
Query: 304 aaacatggcaaatg 317
||||||||||||||
Sbjct: 501 aaacatggcaaatg 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 714
Length adjustment: 9
Effective length of query: 308
Effective length of database: 705
Effective search space: 217140
Effective search space used: 217140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no159_a11.g1 MSMg01no159_a11.g1 CHROMAT_FILE:
MSMg01no159_a11.g1 PHD_FILE: MSMg01no159_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:40 2005
(242 letters)
>mm_chr13_58293202_58293843
Length = 642
Score = 460 bits (238), Expect = e-134
Identities = 241/242 (99%)
Strand = Plus / Minus
Query: 1 cttgaatagttcagtgctttcttttaaactggagatttctttcttagacactggaacttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cttgaatagttcagtgctttcttttaaactggagatttctttcttagacactggaacttg 383
Query: 61 cgagaaatccagcgatgatgcaggaaatgatgagaaaccaggaccgagccttgagcaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cgagaaatccagcgatgatgcaggaaatgatgagaaaccaggaccgagccttgagcaacc 323
Query: 121 tagaaagtattcctgggggctataatgccttacggcgcatgtacaccgatatccaggagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tagaaagtattcctgggggctataatgccttacggcgcatgtacaccgatatccaggagc 263
Query: 181 ctatgctgaatgctgcgcaagaacaggtgagcactcgtgcccaggctcagtctgtgacta 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ctatgctgaatgctgctcaagaacaggtgagcactcgtgcccaggctcagtctgtgacta 203
Query: 241 ag 242
||
Sbjct: 202 ag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
