Query= MSMg01no160_k10.b1 MSMg01no160_k10.b1 CHROMAT_FILE:
MSMg01no160_k10.b1 PHD_FILE: MSMg01no160_k10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:26:40 2005
(324 letters)
>mm_chr13_44268536_44269256
Length = 721
Score = 495 bits (256), Expect = e-144
Identities = 285/300 (95%), Gaps = 10/300 (3%)
Strand = Plus / Plus
Query: 22 ctcttccggttctcaggacccagcgctattgtattgtatcagtgactctgacatcacctt 81
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 222 ctcttccgattctcaggacccagcgctattgtattgtatcagtgactctgacatcaccgt 281
Query: 82 gaaaagacacccaacagaagtgagaggatggaggctctactctaggtatggtccgtcgtg 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gaaaagacacccaacagaagtgagaggatggaggctctactctaggtatggtccgtcgtg 341
Query: 142 gtgaagaccgcacagcagtgggagcaacttccaggctgtggcaccagtggtatgaggttc 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gtgaagaccgcacagcagtgggagcaacttccaggctgtggcaccagtggtatgaggttc 401
Query: 202 ctgtgtgctatcaggaagggctggaaccaagaagagactgtaacccacttcctggaatta 261
|| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 402 ct---tcctatcaggaagggctgtaaccaagaagagactgtaacccacttcctggaatta 458
Query: 262 tactgtcgcctggaaatagctctgtacccttgcaaacgagtgccactagcaggtgactga 321
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tactg-------gaaatggctctgtacccttgcaaacgagtgccactagcaggtgactga 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 721
Length adjustment: 9
Effective length of query: 315
Effective length of database: 712
Effective search space: 224280
Effective search space used: 224280
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no160_k10.g1 MSMg01no160_k10.g1 CHROMAT_FILE:
MSMg01no160_k10.g1 PHD_FILE: MSMg01no160_k10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:26:40 2005
(231 letters)
>mm_chr13_44380241_44380871
Length = 631
Score = 369 bits (191), Expect = e-107
Identities = 221/231 (95%)
Strand = Plus / Minus
Query: 1 caaagatttcaccacgctccgatcgtttaaacggcatctacttctgcctctgtgttcacg 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 431 caaagatttcaccacgctccgatcgtttaaacggcatgtacttctgcctctgtgttcacg 372
Query: 61 cggatgaaattcacagagcaaaacgcagctagaattacctctggcctgaaacttttaaaa 120
|||||| |||||||||||| |||||| |||||||||||||||||||| |||||||||||
Sbjct: 371 aggatgagattcacagagcagaacgcatctagaattacctctggcctggaacttttaaaa 312
Query: 121 agttacccttcatcattactgcggttctgttttactgccgtccggaagtacaaaaaaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 311 agttacccttcatcattactgcggttctgttttactgccgtccggaagtacaaaagaagt 252
Query: 181 ggaaacagaattactttgcctaattccaaactggaaaattaacgcacatgg 231
|||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 251 ggaaacagaattacattgcctaattccaaactggaaaattaacgcatatgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 631
Length adjustment: 9
Effective length of query: 222
Effective length of database: 622
Effective search space: 138084
Effective search space used: 138084
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
