Query= MSMg01no161_d12.b1 MSMg01no161_d12.b1 CHROMAT_FILE:
MSMg01no161_d12.b1 PHD_FILE: MSMg01no161_d12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:34 2005
(420 letters)
>mm_chr13_44214006_44214824
Length = 819
Score = 733 bits (379), Expect = 0.0
Identities = 400/409 (97%), Gaps = 5/409 (1%)
Strand = Plus / Minus
Query: 11 ggaattccccaaatctgtttctctcatacttatgaatggggagacctcacaccccattca 70
||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 775 ggaatcccccaaacctgtttctctcatacttatgaatggggagacctcagaccccattca 716
Query: 71 ggtcctttcagaacccacccatatcacaaaaccaacccctcatctccattcctttccttg 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ggtcctttcagaacccacccatatcacaaaaccaacccctcatctccattcctttccttg 656
Query: 131 aacctttgtgcacgtgcacacacatacacacacacacactttctgaaaggccctttgcct 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 aacctttgtgcacgtgcacacacatacacacacacacactttctgaaaggccctttgcct 596
Query: 191 tcttgtaaaacggtggaatactccagaaggaaaacaaagaatgaattcattttatacacc 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tcttgtaaaacggtggaatactccagaaggaaaacaaagaatgaattcattttatacacc 536
Query: 251 ctctgctttctctcctgagagaaatggtataaggataaacagacattgaatccggctgcc 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ctctgctttctctcctgagagaaatggtataaggataaacagacattgaatccggctgcc 476
Query: 311 tcaggtctgctcgcccggcttgcagttactggtgactcattggaaggtgttatcacca-- 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tcaggtctgctcgcccggcttgcagttactggtgactcattggaaggtgttatcaccagg 416
Query: 369 tttaacatgttgtgaagctttgcatccatacagctccatgcagagcatg 417
|||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ---aacacgttgtgaagctttgcatccatacagctccatgcagagcatg 370
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 819
Length adjustment: 9
Effective length of query: 411
Effective length of database: 810
Effective search space: 332910
Effective search space used: 332910
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_d12.g1 MSMg01no161_d12.g1 CHROMAT_FILE:
MSMg01no161_d12.g1 PHD_FILE: MSMg01no161_d12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:34 2005
(328 letters)
>mm_chr13_44050418_44051145
Length = 728
Score = 582 bits (301), Expect = e-171
Identities = 322/329 (97%), Gaps = 2/329 (0%)
Strand = Plus / Plus
Query: 1 gggatttactttctaacacatgaacttggtgtggagtcattcaaattacagcaagaattc 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 gggatttactttctaacacatgaacttggtgtggagtcattcaaatcacagcaagaattc 260
Query: 61 actctgccacccaggggagcatgaatgggaggtggg-ggctgctgcagacaggttggtta 119
||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 261 actctgccacccacgggagcatgaatggg-ggtgggaggctgctgcagacaggttggtta 319
Query: 120 ccttatgcttctggaacatgcgccttcttcctgaagccctttttctcctgtcctccctgt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ccttatgcttctggaacatgcgccttcttcctgaagccctttttctcctgtcctccctgt 379
Query: 180 catcctatttaagaataataagcaactgtaaaaggcaaaaccaggcacacacatgctaat 239
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 380 catcctatttaagaataataagcaaccgtaaaaggcaaaaccaggcacacacatgctaat 439
Query: 240 ttgcacactgttccttccggtacccaaggaaatgaacaaatctactttcaaggtgaaaaa 299
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 440 ttgcacaccgttccttccggtacccaagggaatgaacaaatctactttcaaggtgaaaaa 499
Query: 300 tgaaaagatcatactttatctttccctta 328
|||||||||||||||||||||||||||||
Sbjct: 500 tgaaaagatcatactttatctttccctta 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 728
Length adjustment: 9
Effective length of query: 319
Effective length of database: 719
Effective search space: 229361
Effective search space used: 229361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
