Query= MSMg01no161_k01.b1 MSMg01no161_k01.b1 CHROMAT_FILE:
MSMg01no161_k01.b1 PHD_FILE: MSMg01no161_k01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:28:27 2005
(354 letters)
>mm_chr13_115673036_115673789
Length = 754
Score = 661 bits (342), Expect = 0.0
Identities = 348/350 (99%)
Strand = Plus / Plus
Query: 1 cgccaattgctaatgccaaaacatacttgctttaagcccagaacttaagaaggttcagaa 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 cgccaattgctaatgccaaaacattcttgctttaagcccagaacttaagaaggttcagaa 260
Query: 61 atatgtgatgagcgccggtcttttccacataattcttcagaggagctcaagactctgacc 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atatgtgatgagcgccagtcttttccacataattcttcagaggagctcaagactctgacc 320
Query: 121 ttttgaatgtttaaagaaagtctgatctctcctctcagatccctcccagggactactaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttgaatgtttaaagaaagtctgatctctcctctcagatccctcccagggactactaat 380
Query: 181 tctcttatagattcttcttacatctagaattaagatcaaacaatttaaagtacagctata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctcttatagattcttcttacatctagaattaagatcaaacaatttaaagtacagctata 440
Query: 241 gtccataactttcaagatattcttctgacctaagcagctgcaaaaataagcaaaaaccat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtccataactttcaagatattcttctgacctaagcagctgcaaaaataagcaaaaaccat 500
Query: 301 gaaatcaaccctattataaagatcgccaagtatatataaccaagtacaga 350
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaatcaaccctattataaagatcgccaagtatatataaccaagtacaga 550
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 754
Length adjustment: 9
Effective length of query: 345
Effective length of database: 745
Effective search space: 257025
Effective search space used: 257025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_k01.g1 MSMg01no161_k01.g1 CHROMAT_FILE:
MSMg01no161_k01.g1 PHD_FILE: MSMg01no161_k01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:28:27 2005
(336 letters)
>mm_chr13_115785624_115786358
Length = 735
Score = 489 bits (253), Expect = e-143
Identities = 311/337 (92%), Gaps = 16/337 (4%)
Strand = Plus / Minus
Query: 1 tcagggtttggtaggcaaggctgagtgagatcttcctcctctgtgggaagcctggctgca 60
||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 717 tcaggttttggtaggcaaggctgagtaagatcttcctcctctgtgggaatcctggctgca 658
Query: 61 gcc-ttcctaacctgtagctcaggtatcaggagagtcagactgagcagctctacaggcag 119
||| || |||||||||||| ||||||||||||||||||||||||| || |||||||||||
Sbjct: 657 gccatt-ctaacctgtagcccaggtatcaggagagtcagactgagtaggtctacaggcag 599
Query: 120 ccctgttgagacaggcttgggccccagaggaccagtgtcctttatgatagct-cagccat 178
|||||||| |||||||||||||||||||||||| ||||||||||||| || | |||||||
Sbjct: 598 ccctgttgcgacaggcttgggccccagaggacccgtgtcctttatgagag-tacagccat 540
Query: 179 aactcacaggggctcgacagagggccgccacagtctgagaagccccattaagtacacaga 238
||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 539 aactcacaggggc----ca--------ccacagtctgagaagccccattaagtacacaga 492
Query: 239 gttcatttctaactccacccagcctgaatgtcacattctaattgaatttattttcaccta 298
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 491 gttcatttctaactccacccagcctgaatgtcacattctaattgaagttattttcaccta 432
Query: 299 catcagcatcactcagcagctcagggagactcttctc 335
|||||||||||||||||||||||||||||||||||||
Sbjct: 431 catcagcatcactcagcagctcagggagactcttctc 395
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 735
Length adjustment: 9
Effective length of query: 327
Effective length of database: 726
Effective search space: 237402
Effective search space used: 237402
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
