Query= MSMg01no164_h16.b1 MSMg01no164_h16.b1 CHROMAT_FILE:
MSMg01no164_h16.b1 PHD_FILE: MSMg01no164_h16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:20 2005
(236 letters)
>mm_chr13_41011675_41012310
Length = 636
Score = 435 bits (225), Expect = e-126
Identities = 231/233 (99%)
Strand = Plus / Minus
Query: 4 ggaattctcttagcttacctgtgcacccggtggccaaacagctcacagagaatgcggagg 63
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ggaattctcttagcttacctatgcacccggtggccaaacagctcacagagaatgcggagg 377
Query: 64 gctttggggtgggggtgggggtaactaaggctggccccatgactaggtttctaggcagaa 123
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 376 gctttggggtgggggtgggggtaaccaaggctggccccatgactaggtttctaggcagaa 317
Query: 124 cgcaccacatctggagacttcagcatctgctccagtcaggaaaatgctgggtgcttaaga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 cgcaccacatctggagacttcagcatctgctccagtcaggaaaatgctgggtgcttaaga 257
Query: 184 ggctccctccctgccccattttgccctcttcgcccatccattgtatattagca 236
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ggctccctccctgccccattttgccctcttcgcccatccattgtatattagca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no164_h16.g1 MSMg01no164_h16.g1 CHROMAT_FILE:
MSMg01no164_h16.g1 PHD_FILE: MSMg01no164_h16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:21 2005
(343 letters)
>mm_chr13_40842453_40843197
Length = 745
Score = 617 bits (319), Expect = 0.0
Identities = 338/345 (97%), Gaps = 2/345 (0%)
Strand = Plus / Plus
Query: 1 agtacattttccataattttaccctgaggaaggagtcatcagaactagacgctgagagcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 agtacattttccataattttaccctgaggaaggagtcatcagaactagacgttgagagca 260
Query: 61 ttaaggcttttatgataatgccccttgtaaaaatgtgaagtatgagtatactgagccctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaggcttttatgataatgccccttgtaaaaatgtgaagtatgagtatactgagccctc 320
Query: 121 tacaaacctatatgctgactccagttcactcccatacagttatctgagaactactgagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacaaacctatatgctgactccagttcactcccatacagttatctgagaactactgagac 380
Query: 181 tattagtaaaagaggtaattgaatgtccagactggtggccggtcctctctatacacattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tattagtaaaagaggtaattgaatgtccagactggtggccggtcctctctatacacattt 440
Query: 241 cctaaggagttaatacattagcgtgtatcttggattaaagacctaataagattttttttt 300
||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||
Sbjct: 441 cctaaggagttaatacattagtgtgtatcttggattaaagatctgataagattttttttt 500
Query: 301 --aaactaataaatgtaaactgagaggacagaatgatcagtgatg 343
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttaaactaataaatgtaaactgagaggacagaatgatcagtgatg 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 745
Length adjustment: 9
Effective length of query: 334
Effective length of database: 736
Effective search space: 245824
Effective search space used: 245824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
