Query= MSMg01no164_j24.b1 MSMg01no164_j24.b1 CHROMAT_FILE:
MSMg01no164_j24.b1 PHD_FILE: MSMg01no164_j24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:32 2005
(324 letters)
>mm_chr13_16842177_16842900
Length = 724
Score = 538 bits (278), Expect = e-157
Identities = 311/328 (94%), Gaps = 10/328 (3%)
Strand = Plus / Minus
Query: 5 gaattcaactacccttgagttcttaccatgactatgacatttaaccattgataacttact 64
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 423 gaattcaactacccttgagttcttaccatgaccatgacatttaaccactgataacttact 364
Query: 65 accccactcttccttttacattcactttttctgttacatcttacttcctcttggtgttta 124
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 363 atcccactcttccttttacattcactttttctgttacatcttacttcctcttggtgatta 304
Query: 125 tttctccagagtaacacttgttgtttcagctttatactagcatgctttgtggtcccctat 184
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tttcttcagagtaacacttgttgtttcagctttatactagcatgctttgtggtcccctat 244
Query: 185 gaactcgaacaaatgcacaatgataaataacaaaacaatcacacacacacacacacaca- 243
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 243 gaactcgaacaaatgcacaatgataaataacaaaacaatcacacacacacatacatacat 184
Query: 244 ---------cacacacacacacacacacacacacacacacacactcgttcatgtgatcca 294
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 acatacatacacacacacacacacacacacacacacacacacactcgttcatgtgatcca 124
Query: 295 gaaatcatgtcacctggtgttcatagtg 322
||||||||||||||||||||||||||||
Sbjct: 123 gaaatcatgtcacctggtgttcatagtg 96
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 58
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no164_j24.g1 MSMg01no164_j24.g1 CHROMAT_FILE:
MSMg01no164_j24.g1 PHD_FILE: MSMg01no164_j24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:32 2005
(189 letters)
>mm_chr13_16711269_16711857
Length = 589
Score = 327 bits (169), Expect = 3e-94
Identities = 175/177 (98%)
Strand = Plus / Plus
Query: 1 tggtgcaaaggataatgccttattatttggcctcaactttaatcaataaaatgggatgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggtgcaaaggataatgccttattatttggcctcaactttaatcaataaaatgggatgaa 260
Query: 61 gaagaaacagctatcaaactcccccaagcaatctaactattttctcattgagtaatcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagaaacagctatcaaactcccccaagcaatctaactattttctcattgagtaatcaaa 320
Query: 121 ggaaggaagaaaggaaggagggaaggaaggaaggaaggaaggaaggaaggaaggaag 177
||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaag 377
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 589
Length adjustment: 8
Effective length of query: 181
Effective length of database: 581
Effective search space: 105161
Effective search space used: 105161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
