Query= MSMg01no171_o08.b1 MSMg01no171_o08.b1 CHROMAT_FILE:
MSMg01no171_o08.b1 PHD_FILE: MSMg01no171_o08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:13 2005
(310 letters)
>mm_chr13_116298204_116298913
Length = 710
Score = 592 bits (306), Expect = e-173
Identities = 306/306 (100%)
Strand = Plus / Minus
Query: 5 gaattcacctttctcctcttgagtagattctcttgctttcattcttcagctcagagatgt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gaattcacctttctcctcttgagtagattctcttgctttcattcttcagctcagagatgt 451
Query: 65 taggtggtgagcattaattaggactgcttcagctctaaagagccctaagcatctctgtaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 taggtggtgagcattaattaggactgcttcagctctaaagagccctaagcatctctgtaa 391
Query: 125 aagtgtcttattaagcccaaaatgggcaaataaggcctattcccaccatgtatccatttc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 aagtgtcttattaagcccaaaatgggcaaataaggcctattcccaccatgtatccatttc 331
Query: 185 tcgttcacttcaggtgtgatggtgaaggccgaggactgacctcacacctctggcttatct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tcgttcacttcaggtgtgatggtgaaggccgaggactgacctcacacctctggcttatct 271
Query: 245 cagtcatttgaaaggatatatcaaattcttaagtactcctcttcccaaaagacaatccac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 cagtcatttgaaaggatatatcaaattcttaagtactcctcttcccaaaagacaatccac 211
Query: 305 aggcaa 310
||||||
Sbjct: 210 aggcaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space: 211001
Effective search space used: 211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no171_o08.g1 MSMg01no171_o08.g1 CHROMAT_FILE:
MSMg01no171_o08.g1 PHD_FILE: MSMg01no171_o08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:13 2005
(287 letters)
>mm_chr13_116169621_116170306
Length = 686
Score = 495 bits (256), Expect = e-144
Identities = 277/284 (97%), Gaps = 1/284 (0%)
Strand = Plus / Plus
Query: 4 tgaagataatgggaaaggtaatttttttcaattctaggctttttatcccaaaaataataa 63
|||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 204 tgaagataatggaaaaggtaatttttt-caattctaggctttttattttaaaaataataa 262
Query: 64 tctaataaggacacttttagccttgaaataataagattttagttattattaggcaaaaat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tctaataaggacacttttagccttgaaataataagattttagttattattaggcaaaaat 322
Query: 124 catgttgaatatcaacactgtctatttccctccctgccttcatatttgtatgcagcattt 183
| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 323 cgtgttgaatatcaacactgtctatttgcctccctgccttcatatttgtatgcagcattt 382
Query: 184 gtcagcacaacagccttggacgatgataaagtgcatttttctgcttgggtggttagccct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gtcagcacaacagccttggacgatgataaagtgcatttttctgcttgggtggttagccct 442
Query: 244 ttcattttttacaagtgacaaaataaaaatctgctgaagagtga 287
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttcattttttacaagtgacaaaataaaaatctgctgaagagtga 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 686
Length adjustment: 9
Effective length of query: 278
Effective length of database: 677
Effective search space: 188206
Effective search space used: 188206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
