Query= MSMg01no173_c22.b1 MSMg01no173_c22.b1 CHROMAT_FILE:
MSMg01no173_c22.b1 PHD_FILE: MSMg01no173_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:48 2005
(321 letters)
>mm_chr13_18679806_18680526
Length = 721
Score = 590 bits (305), Expect = e-173
Identities = 317/321 (98%)
Strand = Plus / Plus
Query: 1 tatcctgttatataactaaagctcactcatacatgtgcttcctgccttgacttaattaac 60
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 201 tatcctgttatataactaaagctcactcatgcatgtgcttcctgcgttgacttaattaac 260
Query: 61 tacatgcaccttggccactcctttgttcccttataactgtgaattctggtacttcttgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacatgcaccttggccactcctttgttcccttataactgtgaattctggtacttcttgtt 320
Query: 121 aaactggctacctgcctcttgcccactaatttgttcctttatcacactagtttccaagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaactggctacctgcctcttgcccactaatttgttcctttatcacactagtttccaagtc 380
Query: 181 agagtccaggaggggacttgactgcaaaagctgactcagggaccctgaaaccaggtgacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agagtccaggaggggacttgactgcaaaagctgactcagggaccctgaaaccaggtgacc 440
Query: 241 ctgggataaggcccagtcactaatgttaacttccttgttaaaccccttgcgtcaaactat 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgggataaggcccagtcaccaatgttaacttccttgttaaaccccttgcgtcaaactat 500
Query: 301 gattggtcacggtaattggcc 321
|||||||||| ||||||||||
Sbjct: 501 gattggtcactgtaattggcc 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no173_c22.g1 MSMg01no173_c22.g1 CHROMAT_FILE:
MSMg01no173_c22.g1 PHD_FILE: MSMg01no173_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:48 2005
(269 letters)
>mm_chr13_18829073_18829740
Length = 668
Score = 489 bits (253), Expect = e-143
Identities = 265/269 (98%), Gaps = 1/269 (0%)
Strand = Plus / Minus
Query: 1 gactgaagaagttgtaacatccccaaactgatctattttaacatgtaatgtgacgtagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gactgaagaagttgtaacatccccaaactgatctattttaacatgtaatgtgacgtagct 409
Query: 61 acttaaacaagtatttaaaaatatgcagggaagagtacaataccaataaaccctctgcat 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 acttaaacaagtatttaaagatatgcagggaagagtacaataccaataaaccctctgcat 349
Query: 121 cccccaggaagaaaaagatgctctaaaggaaacatgagatgtcccacaggtaagctgtgt 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ccccc-ggaagaaaaagatgctctaaaggaaacatgagatgtcccacaggtaagctgtgt 290
Query: 181 attctgaggtaaacgtgttaagtaagatgccacatgttgctcaagtgtggacatcaaatg 240
|||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 289 attctgaggtcaacgtgttaagtaagatgccacatgctgctcaagtgtggacatcaaatg 230
Query: 241 tgcactcaatgtgaaagttaattctggcc 269
|||||||||||||||||||||||||||||
Sbjct: 229 tgcactcaatgtgaaagttaattctggcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 269
Length of database: 668
Length adjustment: 9
Effective length of query: 260
Effective length of database: 659
Effective search space: 171340
Effective search space used: 171340
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
