Query= MSMg01no173_h10.b1 MSMg01no173_h10.b1 CHROMAT_FILE:
MSMg01no173_h10.b1 PHD_FILE: MSMg01no173_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:09 2005
(315 letters)
>mm_chr13_31390258_31390974
Length = 717
Score = 559 bits (289), Expect = e-164
Identities = 305/311 (98%), Gaps = 2/311 (0%)
Strand = Plus / Plus
Query: 4 ggaattcattggatctcccattgaggctgtgatggaatca--gtatggtctgttggtccc 61
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 204 ggaattcattggatctcccattgaggctgtgatggaatcatagtatggtctgttggtccc 263
Query: 62 tacccgggatgagcagacatgtgttcacaactacctagggaaagtccacacaacaaataa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tacccgggatgagcagacatgtgttcacaactacctagggaaagtccacacaacaaataa 323
Query: 122 tgagtatgatttactaaggagaggagagacaatatggagatacctctgaagtataattaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgagtatgatttactaaggagaggagagacaatatggagatacctctgaagtataattaa 383
Query: 182 gaactgacagtcctgatgcatttctaagatgggagctcgggaaactcggacaaggggaac 241
|||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 384 aaactgacagtcctgatgcatttctaagatgggagcttgggaaactcagacaaggggaac 443
Query: 242 tttcgcttgaatgaaggttttaactgatttcatttcataatctttatatttccattaaaa 301
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttcgcttgaatgaagtttttaactgatttcatttcataatctttatatttccattaaaa 503
Query: 302 aaatctctata 312
|||||||||||
Sbjct: 504 aaatctctata 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 717
Length adjustment: 9
Effective length of query: 306
Effective length of database: 708
Effective search space: 216648
Effective search space used: 216648
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no173_h10.g1 MSMg01no173_h10.g1 CHROMAT_FILE:
MSMg01no173_h10.g1 PHD_FILE: MSMg01no173_h10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:09 2005
(284 letters)
>mm_chr13_31438451_31439134
Length = 684
Score = 542 bits (280), Expect = e-158
Identities = 280/280 (100%)
Strand = Plus / Minus
Query: 1 ttagataaagatgtgggctccaggttgagctttctagtttcgagtccagcatatatcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ttagataaagatgtgggctccaggttgagctttctagtttcgagtccagcatatatcatg 287
Query: 61 ttccagatgtgagtcctagggtgacctttgcttcctgtgatgtatcccctcatttataga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ttccagatgtgagtcctagggtgacctttgcttcctgtgatgtatcccctcatttataga 227
Query: 121 agggaatggggtttttcattaattattttatttgttcactttacagcctggtcacaggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 agggaatggggtttttcattaattattttatttgttcactttacagcctggtcacaggtt 167
Query: 181 cccctctttcctctcctccaagtcccagccttacaagtccctccccccattatctcctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 cccctctttcctctcctccaagtcccagccttacaagtccctccccccattatctcctcc 107
Query: 241 cttctcctcagagaaagataagccccctccttgagtacca 280
||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 cttctcctcagagaaagataagccccctccttgagtacca 67
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
