CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCACTTGCCATAAGCTAAGAGCTTTATATGTGTAGTCCCCTAAATAA
AACTATCCAAAACCTCAGAAACTCCTCTGGTTATATGCACAGGCTTGGGT
ATCAGTGTGGAATGTGCGGGAATTTTGCTTCTCAGGTAATTTCACAGAGG
CGACAACCTAACAAAAAAGTGTTCAGTGCTGCATGCAATTAAAGGGATAC
TACAGAGGACTGGATTGTGTCTCCCAAATTTGAAACCCTCAATCCCTCCC
TGCAGTATGTTACCAGTAAGTTACTGAAATAATCAAGGTTAAATGAAATC
ATGGGCTGATTTTACAGCTCACCACACCTGTGTCCATGATTATAGTCAGA
GAGCACAGAGCTCTCCCTGTGAGCACATGGCTAAAAGGTGGCCATCGAGA
TCTATCACCAGAAACCCCGTCCTTCTGTAATCTTGACCTTGGACACTTCA
CTCTGTATTACTGTGGGAAGAAAAGAATTCTATGCTGTTTTAAACTAAAC
CTCTGGTATTGTTATGGCAGCCCAGATGACTACAGCAGATCTTACTAAAA
TCTTAGAAAGTCTGCATTGAAGGTGATTCTAGAGAAGCGGTGATCCAGCC
CGATGCTGTTGTTAGGTTACTGAAATGACTCTTCTTCTGGCCGTGGGTTG
CACTTTTGTGTATACAATGCACTGAN

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCAATGTTTTCATGGAGCTTGTGTTA
GTTTTCTTTTCTAATGTTATTTTCCTACCCTGTCTGGGTGGTTCTGAGAA
GCTCAGGCACAATGTTGGGATCTTCATAACCGATTTATTTTCCAAGTTAA
TTCTGGCAGGACATGAGTTATTTTAGGCTTACTTTAGTTTGTAAATGACA
CTCGTTTTTAAAGTTCAGTGTGGAGAAGAATGATTCCAGTTTAACAGTTT
AATATTCGAACCGATGTTGCCTAATAGAATTCTGGGTTAACTCCTCAAGG
TCCTGTGTATTATTGAGACCTGCCCCCCGCCAAAGTGTCCATGCATTCAT
GAGTAGTTTGGGGGTTGCCATCTCTACTTCTGTCCTAGGATCCACCCTAG
TGGCATGTGGCACATGGCACAACTTTCTGGAGTCTTCCTTTCTCTGACGT
AGAGAGTTTAAGAGACAGCTCAGCAGTTAAGGACGCTGGCTGTTATTTCA
GAGGACCTAGATTTGATTTCCAGTACTCACATGACAGTTTACAACTTTTG
AAACGCCAGTTCTTGGTGATCCAGTGCCCTTCTCTGGCCTCTGAAGGGAG
TGCATGCACGTGGTGCACAGACATCCATGCAACTAAAACACCCATGTGCA
TTAAATAATGTGAAAGTCATTAAAATCN

Query= MSMg01no173_l14.b1 MSMg01no173_l14.b1 CHROMAT_FILE:
MSMg01no173_l14.b1 PHD_FILE: MSMg01no173_l14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:27 2005
         (310 letters)



>mm_chr13_71913643_71914352
          Length = 710

 Score =  569 bits (294), Expect = e-166
 Identities = 303/306 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcacttgccataagctaagagctttatatgtgtagtcccctaaataaaactatcca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacttgccataagctaagagctttatatgtgtagtcccctaaataaaactatcca 264

                                                                       
Query: 65  aaacctcagaaactcctctggttatatgcacaggcttgggtatcagtgtggaatgtgcgg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaacctcagaaactcctctggttatatgcacaggcttgggtatcagtgtggaatgtgcgg 324

                                                                       
Query: 125 gaattttgcttctcaggtaatttcacagaggcgacaacctaacaaaaaagtgttcagtgc 184
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gcattttgcttctcaggtaatttcacagaggcgacaacctaacaaaaaagtgttcagtgc 384

                                                                       
Query: 185 tgcatgcaattaaagggatactacagaggactggattgtgtctcccaaatttgaaaccct 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgcatgcaattaaagggatactacagaggactggattgtgtctcccaaatttgaaaccct 444

                                                                       
Query: 245 caatccctccctgcagtatgttaccagtaagttactgaaataatcaaggttaaatgaaat 304
           ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caatccctccctgcaatgtgttaccagtaagttactgaaataatcaaggttaaatgaaat 504

                 
Query: 305 catggg 310
           ||||||
Sbjct: 505 catggg 510


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space:   211001
Effective search space used:   211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no173_l14.g1 MSMg01no173_l14.g1 CHROMAT_FILE:
MSMg01no173_l14.g1 PHD_FILE: MSMg01no173_l14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:27 2005
         (282 letters)



>mm_chr13_72044489_72045170
          Length = 682

 Score =  530 bits (274), Expect = e-155
 Identities = 280/282 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   caatgttttcatggagcttgtgttagttttcttttctaatgttattttcctaccctgtct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 caatgttttcatggagcttgtgttagttttcttttctaatgttattttcctaccctgtct 423

                                                                       
Query: 61  gggtggttctgagaagctcaggcacaatgttgggatcttcataaccgatttattttccaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gggtggttctgagaagctcaggcacaatgttgggatcttcataaccgatttattttccaa 363

                                                                       
Query: 121 gttaattctggcaggacatgagttattttaggcttactttagtttgtaaatgacactcgt 180
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gttaattctggcaggacacgagttattttaggcttactttagtttgtaaatgacactcgt 303

                                                                       
Query: 181 ttttaaagttcagtgtggagaagaatgattccagtttaacagtttaatattcgaaccgat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 302 ttttaaagttcagtgtggagaagaatgattccagtttaacagtttaatattcgaaccaat 243

                                                     
Query: 241 gttgcctaatagaattctgggttaactcctcaaggtcctgtg 282
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gttgcctaatagaattctgggttaactcctcaaggtcctgtg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space:   183729
Effective search space used:   183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)