Query= MSMg01no175_p19.b1 MSMg01no175_p19.b1 CHROMAT_FILE:
MSMg01no175_p19.b1 PHD_FILE: MSMg01no175_p19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:47:11 2005
(229 letters)
>mm_chr13_51161192_51161820
Length = 629
Score = 377 bits (195), Expect = e-109
Identities = 216/225 (96%), Gaps = 4/225 (1%)
Strand = Plus / Minus
Query: 5 tgttattgcatgtatgtgagtgtgtgggtgaatgtacaaaaatgtgcatgtggaggccag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 540 tgttattgcatgtatgtgagtgtgtgggtgaatgtacaaaaatgtgcatgtggagaccag 481
Query: 65 aggttcacttgtatgtatatgtgtacctgtgtgtgtatctctgtgtgtgtgtgtgaatat 124
|||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 480 aggttcacttgtatgtatatgtgtgcctgtgtgtgtatctc----tgtgtgtgtgaatat 425
Query: 125 acaggcatgtgcatgtggaggccagaggttcacttgtatgtacatgtgtgtctgtgtgtg 184
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 424 acaggcatgtgcatgtggaggccagaggttcacatgtatgtacatgtgtgtctgtgtgtg 365
Query: 185 aatgtacctatatgtgcatgtggaggccagaggttcgttcacatg 229
|||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 364 aatgtaccgacatgtgcatgtggaggccagaggttcgttcacatg 320
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no175_p19.g1 MSMg01no175_p19.g1 CHROMAT_FILE:
MSMg01no175_p19.g1 PHD_FILE: MSMg01no175_p19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:47:11 2005
(189 letters)
>mm_chr13_51035881_51036469
Length = 589
Score = 342 bits (177), Expect = 6e-99
Identities = 186/189 (98%)
Strand = Plus / Plus
Query: 1 ttgctctgccccctctgcacatcctgccaattagaaacaacacaagtgagccagaattcc 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgctctgccccatctgcacatcctgccaattagaaacaacacaagtgagccagaattcc 260
Query: 61 ttctgcctctctctggtagacaagctgccttctctctgtgcccatggatgtcatgaagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctgcctctctctggtagacaagctgccttctctctgtgcccatggatgtcatgaagtc 320
Query: 121 tctatttccctgggagctctctctcatccatccttgactcactcatactgtgcataaaca 180
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctatatccctggaagctctctctcatccatccttgactcactcatactgtgcataaaca 380
Query: 181 cattccttt 189
|||||||||
Sbjct: 381 cattccttt 389
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 589
Length adjustment: 8
Effective length of query: 181
Effective length of database: 581
Effective search space: 105161
Effective search space used: 105161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
