Query= MSMg01no178_c03.b1 MSMg01no178_c03.b1 CHROMAT_FILE:
MSMg01no178_c03.b1 PHD_FILE: MSMg01no178_c03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:51 2005
(412 letters)
>mm_chr13_23562152_23562964
Length = 813
Score = 745 bits (385), Expect = 0.0
Identities = 403/409 (98%), Gaps = 1/409 (0%)
Strand = Plus / Plus
Query: 5 gaattcagggaaagcat-aaactcgaggccttccctgagctctgcccctgcagcctctgt 63
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagggaaaggattaaactcgaggccttccctgagctctgcccctgcagcctctgt 264
Query: 64 gttacctctgattattgctcattctggttctttcatcgtcctgtggctttactgtacacc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gttacctctgattattgctcattctggttctttcatcgtcctgtggctttactgtacacc 324
Query: 124 tggccaaagcggggctgcctttccgtctggatgacaggctgtgggctggtgtgaataatg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tggccaaagcggggctgcctttccgtctggatgacaggctgtgggctggtgtgaataatg 384
Query: 184 ttggattctgccatctcagcagcagcctatatgtctgttattaggctgagtatggtggtg 243
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttggattctgacatctcagcagcagcctatatgtctgttattaggctgagtatggtggtg 444
Query: 244 tacactcgtgacccagcaccagggtcatggaagcagcagttcatgggtatttagggcttt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tacactcgtgacccagcaccagggtcatggaagcagcagttcatgggtatttagggcttt 504
Query: 304 cagtcagtctggggtacacaggtcctgcctcattttaaaactggcctgctctcacccatt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cagtcagtctggggtacacaggtcctgcctcattttaaaactggcctgctctcacccatt 564
Query: 364 ttccacacaccacctctgtcactcggtgatgtctccatttgtcttcacc 412
|||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttcctcttaccacctctgtcactcggtgatgtctccatttgtcttcacc 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 813
Length adjustment: 9
Effective length of query: 403
Effective length of database: 804
Effective search space: 324012
Effective search space used: 324012
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no178_c03.g1 MSMg01no178_c03.g1 CHROMAT_FILE:
MSMg01no178_c03.g1 PHD_FILE: MSMg01no178_c03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:51 2005
(294 letters)
>mm_chr13_23698535_23699228
Length = 694
Score = 520 bits (269), Expect = e-152
Identities = 287/293 (97%)
Strand = Plus / Minus
Query: 1 ctggccattcacaaacaggtaactttgatattaactctcaaactacacacactacccctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ctggccattcacaaacaggtaactttgatattaactctcaaactacacacactacccctt 434
Query: 61 aagggtctgtgcaatgaggcaatatgggcaaaaattaggaatttaatctctctgttaggt 120
||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 433 aagggtctgtgcaatgaggcaatatgggcaaaaattaggaattcaatctctctgttgggt 374
Query: 121 tttgttcagaggactagtagtttgagaaggcagtgggttatatcttatggttacccagta 180
|||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 373 tttgttcagagggctagcagtttgagaaggcagtgggttatattttatggttacccagta 314
Query: 181 gattgtttaagattgatcgcaaagccagccaatcattttgaaccttagccttgcccctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gattgtttaagattgatcgcaaagccagccaatcattttgaaccttagccttgcccctct 254
Query: 241 ggtcagggggtaattactgactgagttttatggtttgggtgctttctgccttg 293
|||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 253 ggtcagggggtaattactgactgagtttcatggtttgggtgctttctgccttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
