TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCCTTCCAGGACACAAAATGCGATGAAATCAGCAAGGATATGTACC
GACATGCATGACTGAGTGTGTGCCAGGCATAAGATCATCTCCACGGCTGC
CTGCTTGGGATGAAAATACAGTCCCTTCCTGACCAGAAAAGCAATGTGTG
TTTAACTTAAGCCAGTTCAGCTGGCAAGAAGATAATTTCAGTTTCCCCTC
CCTTGCCCATGATTGAAACCCATGTCTACTTCCAAAACCACATTCATATT
AATTTATTATCTCATATATGACAGTCTGTGAGCCTCATAAAGTATGGGCT
GTATGCTTTATTTTATTCAACCTGAGGAGTTTTACCTCTCACACTCTCCA
TAGCTTCAGGCACCAGCAGCTCTACGCTGCCAAAGTTAGTGAGATTTGAA
CAACCCATCAGTAAAAGCCCCAGAACTGCAGTCTCTCATGGACCGTGACA
CCAACCACGAGACTGTGATTGTAACCTCCTCCCCAGCCCAGCACGGAACA
CTGGTTGCCCAGCCTCCTCTCATTTCTACCATTTAAAAATTAGCATAAAA
GGAAATATCCAAGTATCTGACAAATTACCCTGACTCATGTCTGCATTAAT
CCTGTAAATGACTTATTGTTCTCTGTCTCGACTTGCACATCCAAACCAGT
CTGAAGTTACCCCG

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAACAGCGCAGGAAAAGAGTTATTTATCA
CCGTGATCAAGTGTTGTATTCCCACAGGGCAAGGATGGCTCAAGTACACA
AATCGATAAATATGGATGTGCTACATCAATCAAGTGGAGGATAAAATCCC
ACCCAATCGTATTAATAGATGTAGAAAAGCCACTTGGCAAAATTTAACAA
CTGTTTAGGATTATACATTTTGAATGTGGGCTGGAGAGATGGCTCTGTGG
TTGAGAACAGTTGCTGCTCTTACAATAGACCCAAGTTTGGTTCCAAGAAT
CCATATGATTTCATATGGCACCTCACACCTTCTGTAACTCCAGTTCCAGG
GGATCCGGTGAACTCTTCTGGACTCTTCAGACTCTAAGCATACATGTGAC
ATAACACATACGTGGAAGCAAACATTTACACAAATAAAATAAAAATAAAT
TAAAATTGAATGTATGCGGTATAAAGTAATATATCCTAACACAATTATAT
GTAAGTCCACATATAATTAGCTAACAGCTAGTGCTATACCCAGTAGTAAA
AAGAAGAAAACTTTGCATACAATGATACCCCCAACTTGCCAATTCTGTTC
TATATTATATTGGGGTCCTAGTCAGAAAACAAATAAAATATGCTCACATT
ACAAAGAAATAN

Query= MSMg01no178_k19.b1 MSMg01no178_k19.b1 CHROMAT_FILE:
MSMg01no178_k19.b1 PHD_FILE: MSMg01no178_k19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:31 2005
         (661 letters)



>mm_chr13_34767893_34768954
          Length = 1062

 Score = 1234 bits (638), Expect = 0.0
 Identities = 653/658 (99%), Gaps = 1/658 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcccttccaggaca-caaaatgcgatgaaatcagcaaggatatgtaccgacatgca 63
           |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcccttccaggaaaacaaaatgcgatgaaatcagcaaggatatgtaccgacatgca 264

                                                                       
Query: 64  tgactgagtgtgtgccaggcataagatcatctccacggctgcctgcttgggatgaaaata 123
           ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 265 tgactgagtgtgtgccaggcataagctcatctccacggctgcctgctcgggatgaaaata 324

                                                                       
Query: 124 cagtcccttcctgaccagaaaagcaatgtgtgtttaacttaagccagttcagctggcaag 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cagtcccttcctgaccagaaaagcaatgtgtgtttaacttaagccagttcagctggcaag 384

                                                                       
Query: 184 aagataatttcagtttcccctcccttgcccatgattgaaacccatgtctacttccaaaac 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagataatttcagtttcccctcccttgcccatgattgaaacccatgtctacttccaaaac 444

                                                                       
Query: 244 cacattcatattaatttattatctcatatatgacagtctgtgagcctcataaagtatggg 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cacattcatattaatttattatctcatatatgacagtctgtgagcctcataaagtatggg 504

                                                                       
Query: 304 ctgtatgctttattttattcaacctgaggagttttacctctcacactctccatagcttca 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctgtatgctttattttattcaacctgaggagttttacctctcacactctccatagcttca 564

                                                                       
Query: 364 ggcaccagcagctctacgctgccaaagttagtgagatttgaacaacccatcagtaaaagc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggcaccagcagctctacgctgccaaagttagtgagatttgaacaacccatcagtaaaagc 624

                                                                       
Query: 424 cccagaactgcagtctctcatggaccgtgacaccaaccacgagactgtgattgtaacctc 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cccagaactgcagtctctcatggaccgtgacaccaaccacgagactgtgattgtaacctc 684

                                                                       
Query: 484 ctccccagcccagcacggaacactggttgcccagcctcctctcatttctaccatttaaaa 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ctccccagcccagcacggaacactggttgcccagcctcctctcatttctaccatttaaaa 744

                                                                       
Query: 544 attagcataaaaggaaatatccaagtatctgacaaattaccctgactcatgtctgcatta 603
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 attagcatgaaaggaaatatccaagtatctgacaaattaccctgactcatgtctgcatta 804

                                                                     
Query: 604 atcctgtaaatgacttattgttctctgtctcgacttgcacatccaaaccagtctgaag 661
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 atcctgtaaatgacttattgttctctgtctcgacttgcacatccaaaccagtctgaag 862


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1062
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1052
Effective search space:   684852
Effective search space used:   684852
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)