NATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCCACTTCCAGGTGCCGGCCCACTCGTCTGTCTGGAAACGCTTGG
CCAGCTTTGAAGTCACGACTCAGTTTCAGCAGCTAAATAGTTTCAGATGT
GACAATCTAGTTTTATGGGCTTAATAATTCCGACACATGTGCAGTAGGGG
CCCAGCAGTTCCTGTGGTGCCTGGCGGATCCCCTGCAGGGGCTGAGAGCC
ATGAAGTCCTGAGTGCCTGAGAATCTAAGTCAAGATGTTTAAGGATGGAT
GATCCAGAGCCACCGCAGAAAGGGAACACAACAAGTGCACATGAGCGTCT
TGCTTTCTTCTAAGATCTGCGGGGTGTTTTTACTCTACACACACACACAC
ACACACACTCACACACACACACGCACGCACGCAAGCATGCATGCACGCAC
GCACGCACGCACGCACACACTCATTTTTTTTAATTGGGGGAGGCTTGGAC
CATTTTCATCAGGGGTTGTATAAATAAACCCTTGATGAAATTTATAAAGG
CTGGGTAGCTGGGGGGGGGGGTGACAGTTTCTCTTATTCATTCCATCTTT
CCTTTCCTCACTGACCGCCTTCCTCCCATTCCGTCTTTTTTCATTTTCCT
TTCCTTCTTTCCTCCTTCTCTCTTTTTTTTCCTTCTCCCTTTTTTCCT

TGTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCCATGGTAGACGGTGGGCCAACATCAGAAGA
CTGCATTCCCAGTACATGGCAGTACTGGGTGACAGAGTACTACCCAGTGT
CTTTCAAGAGAATGTGGAAAGATGAAAGGCAGGATAGGAAAGCTCCCTTT
ACAGGGCATATATGGACCAGTTCAGGATGGATGGCCGATCTAGCGATTTA
GCGCGGACTGTAACTAGGTTCCCACAGGTACTACACGCTACTGTCTGCGG
ATTGTGATAACACCTGTATCATACTCTTGCTGAAACCTGTTCATCCTGAC
TGGTCATGTTCTATTTCACATCTCACAAATGCCACAGTTTTAGCTCATAC
TGGTAATCGCCACGCTCCTGTTCGGAGATAGAGAGTCTCTATCCCTATAT
TCAAGACTCCCAGCTGACCTAAATTCTGGACCTTTGGTATTTGTACAACG
CGTGTTTCTTTGTTTCCACATTATCGTTTAACCCCCGTCCTTTTCTTTAT
TCTGCCAACTCGTTTAACAACCTTACCATGTCCTCTCCCCCCTATCCCCT
TCCTCTTTCGGCCCCACCTCTACCAACTTTCCGCCGCTAATTGTGCTTTT
TTTGCCCGGTGTGTTTAAATATCGGCGCCTCAATGCACTTGTTGGCCTTT
GGGCACTTGTGCCACCCCCCCTCCGTTACGGCGATGCCGATTTTTCTTTT
C

Query= MSMg01no182_a18.b1 MSMg01no182_a18.b1 CHROMAT_FILE:
MSMg01no182_a18.b1 PHD_FILE: MSMg01no182_a18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:41 2005
         (530 letters)



>mm_chr13_73971155_73972084
          Length = 930

 Score =  741 bits (383), Expect = 0.0
 Identities = 467/529 (88%), Gaps = 57/529 (10%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattccacttccaggtgccggcccactcgtctgtctggaaacgcttggccagctttga 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccacttccaggtgccggcccactcgtctgtctggaaacgcttggccagctttga 263

                                                                       
Query: 64  agtcacgactcagtttcagcagctaaatagtttcagatgtgacaatctagttttatgggc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agtcacgactcagtttcagcagctaaatagtttcagatgtgacaatctagttttatgggc 323

                                                                       
Query: 124 ttaataattccgacacatgtgcagtaggggcccagcagttcctgtggtgcctggcggatc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttaataattccgacacatgtgcagtaggggcccagcagttcctgtggtgcctggcggatc 383

                                                                       
Query: 184 ccctgcaggggctgagagccatgaagtcctgagtgcctgagaatctaagtcaagatgttt 243
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 384 ccctgcaggggctgagagccatgaagtcctgaatgcctgagaatctaagtcaagatgttt 443

                                                                       
Query: 244 aaggatggatgatccagagccaccgcagaaagggaacacaacaagtgcacatgagcgtct 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaggatggatgatccagagccaccgcagaaagggaacacaacaagtgcacatgagcgtct 503

                                                                       
Query: 304 tgctttcttctaagatctgcggggtgtttttactctacacacacacacacacacacactc 363
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 504 tgctttcttctaggatctgcggggtgtttttactctacacacacacacacacacacac-- 561

                                                                       
Query: 364 acacacacacacgcacgcacgcaagcatgcatgcacgcacgcacgcacgcacgcacacac 423
           |||||||                    |   |                            
Sbjct: 562 acacaca--------------------t---t---------------------------- 570

                                                                       
Query: 424 tcatttttttt--aattgggggaggcttggaccattttcatcaggggttgtataaataaa 481
           |  ||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 571 t--tttttttttaaattgggggagtcttggaccattttcatcaggggttgtataaataaa 628

                                                            
Query: 482 cccttgatgaaatttataaaggctgggtagctgggggggggggtgacag 530
           ||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 629 cccttgatgaaatttataaaggctgggtagctgggggcgggggtaacag 677


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 930
Length adjustment: 10
Effective length of query: 520
Effective length of database: 920
Effective search space:   478400
Effective search space used:   478400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)