Query= MSMg01no183_c11.b1 MSMg01no183_c11.b1 CHROMAT_FILE:
MSMg01no183_c11.b1 PHD_FILE: MSMg01no183_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:05 2005
(622 letters)
>mm_chr13_51084805_51085826
Length = 1022
Score = 1166 bits (603), Expect = 0.0
Identities = 615/619 (99%)
Strand = Plus / Minus
Query: 4 ggaattcatagccactacgcttcaagatctccataccaagatccaggtcagaaatttgta 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 ggaattcatagccactatgcttcaagatctccataccaagatccaggtcagaaatttgta 665
Query: 64 tcttccagcctccagattagggtcactggtgagccttccaattctggattgtagttcatt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 tcttccagcctccagattagggtcactggtgagccttccaattctggattgtagttcatt 605
Query: 124 ccagatacagtcaagttgacaaccaggaatagccactacatgaagttaacctataatgaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ccagatacagtcaagttgacaaccaggaatagccactacatgaagttaacctataatgaa 545
Query: 184 gcattgatacccctactactcacagaggctagcaaataaaaagcccaaagccaggaacgg 243
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gcaatgatacccctactactcacagaggctagcaaataaaaagcccaaagccaggaacgg 485
Query: 244 gttacctcatgtggatttgttgaacagtgaggccccctaggccctccaatgatgctggct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gttacctcatgtggatttgttgaacagtgaggccccctaggccctccaatgatgctggct 425
Query: 304 gttgccagtactcttgattaccactcagaacgtgacagtaagatcctattactgaacata 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gttgccagtactcttgattaccactcagaacgtgacagtaagatcctattactgaacata 365
Query: 364 ctgtgagatcctggcttaaagcatttgtccctgaaaggtagagcccctaaaacatttccc 423
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 364 ctgtgagatcctggcttaaagcatttctccctgaaaggtagagcccctaaaacatttccc 305
Query: 424 caagcttgttttccctgatctttaaaaatacagctagaaagaagctctttgctctctata 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 caagcttgttttccctgatctttaaaaatacagctagaaagaagctctttgctctctata 245
Query: 484 gccagcaaaaagccttttttgtttctatactttacaaccagagatgcctgccttcctgtg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gccagcaaaaagccttttttgtttctatactttacaaccagagatgcctgccttcctgtg 185
Query: 544 ccgaagacaccgagataaaaattcagaaagaactcactccccactcctgccttgtaaatt 603
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ccgaggacaccgagataaaaattcagaaagaactcactccccactcctgccttgtaaatt 125
Query: 604 tcaccaaggacacccggaa 622
|||||||||||||||||||
Sbjct: 124 tcaccaaggacacccggaa 106
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no183_c11.g1 MSMg01no183_c11.g1 CHROMAT_FILE:
MSMg01no183_c11.g1 PHD_FILE: MSMg01no183_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:06 2005
(549 letters)
>mm_chr6_47126765_47127711
Length = 947
Score = 878 bits (454), Expect = 0.0
Identities = 523/546 (95%), Gaps = 2/546 (0%)
Strand = Plus / Plus
Query: 2 tttaggttccagattgtcaaccctgtggcttctgcctctacttctgcatttaacccctct 61
|||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 202 tttaggatccagattgtcaaccctgtggcttctgcctctacatctgtatttaacccctct 261
Query: 62 ggagctgaaccagacaacacacaatggggtagctttgaaataaaccacaagtgtctatat 121
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 262 ggagctgaaccacacaacacacaatggggtagctttgaaataacccacaagtgtctacat 321
Query: 122 cccccagtgcctgcactacagacttctccagctgcccagaggaggatgcaaaggaggcag 181
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 322 cccccaatgcctgcactacagacttctccagctgcccagaggagggtgcaaaggaggcag 381
Query: 182 ggtcatacaaattccaaagtgaataaaagggcatatagtgaaaacacaaggcagagacag 241
|||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 382 ggtcctacaaattccaaagtgaataaaagggcatatagtgaaaacacaagccagagacag 441
Query: 242 tgtgtgcttcacactattccccagactacccatgtctccggtgattattactatgctagc 301
|||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||
Sbjct: 442 tgtgtgcttcacactattccccagactacc-atgtctccggtgagaac-actatgctagc 499
Query: 302 ctgcccctgcaatgggggaagcttccacctctgggctgcccagttccacagcttagccaa 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctgcccctgcaatgggggaagcttccacctctgggctgcccagttccacagcttagccaa 559
Query: 362 tgtcatttcagcatctgtttcttcagctgtaaaagtgggtcaatcagagagagcatgtac 421
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 560 tgtcatttcagcatctgtttcttcagctgtaaaagtgggtcagtcagagagagcatgtac 619
Query: 422 ctacagaatattacgcacatgtattgaaacaatatgtgttaaataaatacagtagatgga 481
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctacagaatattatgcacatgtattgaaacaatatgtgttaaataaatacagtagatgga 679
Query: 482 taagacttctgttgcctttcaaactcacggtagatgctgatagttggagaggaggaggag 541
||||||||||| ||||||||||||| | |||||||||||| | ||||||||||||||||
Sbjct: 680 taagacttctgctgcctttcaaactaatggtagatgctgacaattggagaggaggaggaa 739
Query: 542 gaagtg 547
||||||
Sbjct: 740 gaagtg 745
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 947
Length adjustment: 10
Effective length of query: 539
Effective length of database: 937
Effective search space: 505043
Effective search space used: 505043
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
