Query= MSMg01no183_d15.b1 MSMg01no183_d15.b1 CHROMAT_FILE:
MSMg01no183_d15.b1 PHD_FILE: MSMg01no183_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:11 2005
(641 letters)
>mm_chr13_9111419_9112460
Length = 1042
Score = 1203 bits (622), Expect = 0.0
Identities = 637/642 (99%), Gaps = 1/642 (0%)
Strand = Plus / Minus
Query: 1 aatatgtacagaggaaaagatggctgtctccaggaaggctgctattctagctctttgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 aatatgtacagaggaaaagatggctgtctccaggaaggctgctattctagctctttgttt 692
Query: 61 ttacagacttggtacctctataatagtctctttaatgagtattcttatagtaaatgtgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 ttacagacttggtacctctataatagtctctttaatgagtattcttatagtaaatgtgtt 632
Query: 121 attcaaagatactggcagatgaaagaatgagcccaatctcagtgcagtacctaattgtac 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 631 attcaaagatactggcagatgaaagaatgagcccaatctcagtacagtacctaattgtac 572
Query: 181 atttactctggcacccagcgcaggtgtactcctaatcagacatggccaataagcttcaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 atttactctggcacccagcgcaggtgtactcctaatcagacatggccaataagcttcaag 512
Query: 241 attattttaaatttccttttatgcacgcacacctgtgcttctactgaaacagctagtgtt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 511 attattttaaatttccttttatgcacgcacacctgtgcttctactgaaacagctagtggt 452
Query: 301 aggattcgagttgtttgtgcttggggagagggatgataaaatcagacacagacagaacaa 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aggattcgagttgtttgtgctgggggagagggatgataaaatcagacacagacagaacaa 392
Query: 361 tttattagcaaaatctgactggaaaggtaatcaattcacaagaaatata-caaataaaat 419
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 391 tttattagcaaaatctgactggaaaggtaatcaattcacaagaaatataccaaataaaat 332
Query: 420 tgtatttttaaatgtcacactaataaaaatctaatctagaacttatgactgcttttgtga 479
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 331 tgtatttttaaatgtcacactaataaaaatctaatttagaacttatgactgcttttgtga 272
Query: 480 aatactgttaggtcccaaagaaacctgagacagattccacttagtacctacggctcctcc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aatactgttaggtcccaaagaaacctgagacagattccacttagtacctacggctcctcc 212
Query: 540 cagcacttctcaccctaccccaccctacacctctccagccagaggccagatttccttttc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 cagcacttctcaccctaccccaccctacacctctccagccagaggccagatttccttttc 152
Query: 600 cccagcttctgattcctataataactcagtcattctgactac 641
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 cccagcttctgattcctataataactcagtcattctgactac 110
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1042
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1032
Effective search space: 651192
Effective search space used: 651192
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no183_d15.g1 MSMg01no183_d15.g1 CHROMAT_FILE:
MSMg01no183_d15.g1 PHD_FILE: MSMg01no183_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:11 2005
(644 letters)
>mm_chr13_8951293_8952336
Length = 1044
Score = 1230 bits (636), Expect = 0.0
Identities = 642/644 (99%)
Strand = Plus / Plus
Query: 1 atcatcttgacatttctcctgattcagattcgtgcctcagttacctaagaaatggtaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcatcttgacatttctcctgattcagattcgtgcctcagttacctaagaaatggtaaga 260
Query: 61 aaaatctagaaggaggggttctcacactgtcaaaattctagtcatagatatcccagataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaatctagaaggaggggttctcacactgtcaaaattctagtcatagatatcccagataa 320
Query: 121 catataaacccagaaggaatggctaagacaggccttgagttacacccaacacctcagagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catataaacccagaaggaatggctaagacaggccttgagttacacccaacacctcagagg 380
Query: 181 tgcttcaagacatttctgagttgaaccaaggaggtaaggaccagtgtgaggtaggtgaat 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcctcaagacatttctgagttgaaccaaggaggtaaggaccagtgtgaggtaggtgaat 440
Query: 241 ggagccacagccccacctgcgcttctcaagggacagcagctgtcttcttgtcatgagaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggagccacagccccacctgcgcttctcaagggacagcagctgtcttcttgtcatgagaaa 500
Query: 301 atgatagagtgtttagtaatactaaacccctcattatgagaggatgaagcaagtcaccct 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 atgatagagtgtttagtaatactaaacccctcattatgagaggatgaatcaagtcaccct 560
Query: 361 tcattgtgcttgactccactgtgtttcatggtcaaaatgttgagaaattagtataagaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcattgtgcttgactccactgtgtttcatggtcaaaatgttgagaaattagtataagaaa 620
Query: 421 ggaagatctgtctgtctctgtctcaacaatgatttggactaagctatcctaatgacagcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggaagatctgtctgtctctgtctcaacaatgatttggactaagctatcctaatgacagcc 680
Query: 481 acttaaggaccacatttcagaaggtaagtatggcaaaattagactgttttgtctctctgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acttaaggaccacatttcagaaggtaagtatggcaaaattagactgttttgtctctctgc 740
Query: 541 caaatcaaaaggatcttcaaacagaacacccacttgtgtaaccacatatataggacagct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 caaatcaaaaggatcttcaaacagaacacccacttgtgtaaccacatatataggacagct 800
Query: 601 gcagctgaggcagcccatctccattcactcccaggtttcagagg 644
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gcagctgaggcagcccatctccattcactcccaggtttcagagg 844
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
