Query= MSMg01no184_j13.b1 MSMg01no184_j13.b1 CHROMAT_FILE:
MSMg01no184_j13.b1 PHD_FILE: MSMg01no184_j13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:02 2005
(313 letters)
>mm_chr13_14060332_14061044
Length = 713
Score = 584 bits (302), Expect = e-171
Identities = 308/310 (99%)
Strand = Plus / Plus
Query: 4 ggaattctttggtatcttgtgttttaccaaaggagtcaaacatgttatttatattatgag 63
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctttggtatcttgtgttttaacaaaggagtcaaacatgttatttatattatgag 263
Query: 64 gactgtgtttgatttcaaacctctgtaataggctgtagtttatcactttaatgtatccta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gactgtgtttgatttcaaacctctgtaataggctgtagtttatcactttaatgtatccta 323
Query: 124 agcaggtagtgcactgtgtgtgttagaacacaaaggtgcaactggagtctaggggacttg 183
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 324 agcaggtagtgcactgtgtgtgctagaacacaaaggtgcaactggagtctaggggacttg 383
Query: 184 aagtttagtacatataggtaggttgatagtacagtatagggtacaatggagatatatgta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aagtttagtacatataggtaggttgatagtacagtatagggtacaatggagatatatgta 443
Query: 244 aaatagcctggaatagcctggagagctggttcagcagttaagaatacttgctgctcttcc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaatagcctggaatagcctggagagctggttcagcagttaagaatacttgctgctcttcc 503
Query: 304 agagaaacct 313
||||||||||
Sbjct: 504 agagaaacct 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no184_j13.g1 MSMg01no184_j13.g1 CHROMAT_FILE:
MSMg01no184_j13.g1 PHD_FILE: MSMg01no184_j13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:02 2005
(284 letters)
>mm_chr13_14150714_14151394
Length = 681
Score = 503 bits (260), Expect = e-147
Identities = 277/284 (97%), Gaps = 3/284 (1%)
Strand = Plus / Minus
Query: 1 aaagatagctggggctatatatatatatatatatcttgtcaaaaaatacatgcatgcatg 60
|||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 481 aaaggtagctggggctatatgtatatatatatatctt---aaaaaatacatgcatgcatg 425
Query: 61 catgccatgatttatattctaggaagtgttgaagtaaatgcggaatccaagtaattcaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 catgccatgatttatattctaggaagtgttgaagtaaatgcggaatccaagtaattcaac 365
Query: 121 actacagaaaataactatattcaaatgagtatgcatcttagaaacaatctccaaatttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 actacagaaaataactatattcaaatgagtatgcatcttagaaacaatctccaaatttta 305
Query: 181 ttgatttgagataaatattcttcacaaattataaagcacacctgtcttaagcagagcatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 304 ttgatttgagataaatattcttcacaaattataaagcacacctgtcttaagcagagcgtt 245
Query: 241 tgttggtttgtaatcatagaaaggtctgattttaatttgttttg 284
||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tgttgttttgtaatcatagaaaggtctgattttaatttgttttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 681
Length adjustment: 9
Effective length of query: 275
Effective length of database: 672
Effective search space: 184800
Effective search space used: 184800
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
