Query= MSMg01no188_i11.b1 MSMg01no188_i11.b1 CHROMAT_FILE:
MSMg01no188_i11.b1 PHD_FILE: MSMg01no188_i11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:12 2005
(314 letters)
>mm_chr13_19844240_19844953
Length = 714
Score = 576 bits (298), Expect = e-169
Identities = 307/310 (99%)
Strand = Plus / Plus
Query: 4 ggaattctcagaggtattatatccatccattcttcaaacattacctgcaaaagcaaaaac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcagaggtattatatccatccattcttcaaacattacctgcaaaagcaaaaac 263
Query: 64 accagtgcatctgaacaaacttccagactgttgatcacagctcctccagtgcactgacaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 accagtgcatctgaacaaacttccagactgttgatcacagctcctccagtgcactgacaa 323
Query: 124 agtggctctgaagtttatctgtttttatgacatatactttatctgttttaagaacaaaga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 324 agtggctctgaagtttatctgtttttatgacatatactttatctgttttaagaacgaaga 383
Query: 184 taacagtctctgaatttttatagtctctatacctaaaacaccaagtcgttttcatcagtc 243
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taccagtctctgaatttttatagtctctatacctaaaacaccaagtcgttttcatcagtc 443
Query: 244 agtttgatactgataataatgcagaactgcagactgagtttaggaagaggttcacagttc 303
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agtgtgatactgataataatgcagaactgcagactgagtttaggaagaggttcacagttc 503
Query: 304 taagagctca 313
||||||||||
Sbjct: 504 taagagctca 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no188_i11.g1 MSMg01no188_i11.g1 CHROMAT_FILE:
MSMg01no188_i11.g1 PHD_FILE: MSMg01no188_i11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:12 2005
(287 letters)
>mm_chr13_20003369_20004056
Length = 688
Score = 513 bits (265), Expect = e-150
Identities = 280/285 (98%), Gaps = 1/285 (0%)
Strand = Plus / Minus
Query: 1 agaatgcatgtggagcagggagggaagcagctgaggaagtgccaactctgctgagtagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 agaatgcatgtggagcagggagggaagcagctgaggaagtgccaactctgctgagtagtg 426
Query: 61 gctcagaggctgggtgtggagaag-aatgagcagggaaaactgaacaaggggctgagagc 119
|||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 425 gctcagaggctgggtgtggagaagaaatgagcagggaaaactgaacaaggagctgagagc 366
Query: 120 ttctcctgtggggcccggtgaggacttcgaaaagccttgctgatcttgctctctcccagg 179
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ttctcctgtggggcctggtgaggacttcgaaaagccttgctgatcttgctctctcccagg 306
Query: 180 gagacctgtaagaacaaaatgctggactatgtcactcattaaaaagccacaagggcaaac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gagacctgtaagaacaaaatgctggactatgtcactcattaaaaagccacaagggcaaac 246
Query: 240 tgagtttcagtaacatcagatttcataacacaccaatgttctata 284
||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 245 tgagtttcaataacatcagatttcaaaacacaccaatgttctata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 688
Length adjustment: 9
Effective length of query: 278
Effective length of database: 679
Effective search space: 188762
Effective search space used: 188762
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
